RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 RGS14O43566 566 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 PLOD3O60568 738 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 LILRA1O75019 489 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 KCNH1O95259 989 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 WISP3O95389 354 aaPredicted RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 UTS2O95399 124 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 BCL10O95999 233 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 MTHFD2P13995 350 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 DAOP14920 347 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 IFNGR1P15260 489 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 SLC7A1P30825 629 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 EIF1P41567 113 aaKnown RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 ELK3P41970 407 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 IDH3GP51553 393 aaPredicted RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 PRR5P85299 388 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 PSG6Q00889 435 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 DUSP2Q05923 314 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 CALCOCO2Q13137 446 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 FRG1Q14331 258 aaKnown RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 PPP1R7Q15435 360 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 OCLNQ16625 522 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 AP1ARQ63HQ0 302 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 FAM180BQ6P0A1 224 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 COMMD6Q7Z4G1 85 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 MISPQ8IVT2 679 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 CCDC116Q8IYX3 515 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 UBE2J2Q8N2K1 259 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 METTL4Q8N3J2 472 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 BPIFB2Q8N4F0 458 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ZNF433Q8N7K0 673 aaPredicted RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 L3MBTL4Q8NA19 623 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 NUP43Q8NFH3 380 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 OR51F2Q8NH61 342 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ACTRT2Q8TDY3 377 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 FBF1Q8TES7 1133 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ZFP90Q8TF47 636 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 WDR60Q8WVS4 1066 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ZBTB9Q96C00 473 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 LRRC39Q96DD0 335 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 CNRIP1Q96F85 164 aaPredicted RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 ZNF681Q96N22 645 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 PSD2Q9BQI7 771 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 SHCBP1LQ9BZQ2 653 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 RTN4RQ9BZR6 473 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 CDC42EP4Q9H3Q1 356 aaKnown RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 ALG9Q9H6U8 611 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ANKRA2Q9H9E1 313 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 CAB39LQ9H9S4 337 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 PPCSQ9HAB8 311 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 DDX28Q9NUL7 540 aaKnown RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 MED17Q9NVC6 651 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 HIF1ANQ9NWT6 349 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ASB6Q9NWX5 421 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 TAS2R16Q9NYV7 291 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 FLRT3Q9NZU0 649 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 EMC3Q9P0I2 261 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 MCM8Q9UJA3 840 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 TMCC3Q9ULS5 477 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 NFU1Q9UMS0 254 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ZNF232Q9UNY5 417 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 WBP11Q9Y2W2 641 aaKnown RBP5.16□□□□□ -1.58
SMG6-219ENST00000575663 AMDHD2Q9Y303 409 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 ACOT9Q9Y305 439 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 RYR3Q15413 4870 aa5.16□□□□□ -1.58
SMG6-219ENST00000575663 A0A1W2PR80 420 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 ZNF724A8MTY0 619 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 ALG1L2C9J202 215 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 ATP6V1G2-DDX39BF2Z307 99 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 UBXN8O00124 270 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 DNALI1O14645 258 aaPredicted RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 EIF3HO15372 352 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMG6-219ENST00000575663 NME6O75414 186 aaPredicted RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 PDE5AO76074 875 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 SLITRK5O94991 958 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 CLDN9O95484 217 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 PNPP00491 289 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 TFP02787 698 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 MSMBP08118 114 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 HKR1P10072 659 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 GFAPP14136 432 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 HPGDP15428 266 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 PGCP20142 388 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 PSMA4P25789 261 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 MPIP34949 423 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 SERPINF1P36955 418 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 SLC1A3P43003 542 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 CCNG1P51959 295 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 MANFP55145 182 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 VSNL1P62760 191 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 UBA52P62987 128 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 TRA2BP62995 288 aaKnown RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 GUCY2DQ02846 1103 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 SLC18A2Q05940 514 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 C2orf54Q08AI8 447 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 FOXF1Q12946 379 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 SELENBP1Q13228 472 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 MSS51Q4VC12 460 aa5.15□□□□□ -1.59
SMG6-219ENST00000575663 BEND6Q5SZJ8 279 aaPredicted RBP5.15□□□□□ -1.59
SMG6-219ENST00000575663 FBXW9Q5XUX1 488 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms