RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 GFRALQ6UXV0 394 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 CCDC121Q6ZUS5 278 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 CCDC80Q76M96 950 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 ZNF550Q7Z398 422 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 SIAH3Q8IW03 269 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 ZNF440Q8IYI8 595 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 ARHGAP24Q8N264 748 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 SMYD1Q8NB12 490 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 OR5W2Q8NH69 310 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 C1GALT1C1Q96EU7 318 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 SLX1AQ9BQ83 275 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 PINK1Q9BXM7 581 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 OR2B2Q9GZK3 357 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 SLC6A15Q9H2J7 730 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 ACKR4Q9NPB9 350 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 PRPF19Q9UMS4 504 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 RPH3AQ9Y2J0 694 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 HRH3Q9Y5N1 445 aa13.19□□□□□ -0.3
NPLOC4-218ENST00000574964 A0A087WZY1 265 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 CDHR4A6H8M9 788 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 LINGO3P0C6S8 592 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 HSD17B1P14061 328 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 PGCP20142 388 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 RBPJQ06330 500 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 DMTNQ08495 405 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 SKP2Q13309 424 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 RAET1LQ5VY80 246 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 TRILQ7L0X0 811 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 ATCAYQ86WG3 371 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 SFXN2Q96NB2 322 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 DNAJB12Q9NXW2 375 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 ICAM5Q9UMF0 924 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 MRPS18CQ9Y3D5 142 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 LIPGQ9Y5X9 500 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 BOD1L1Q8NFC6 3051 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 MYO7BQ6PIF6 2116 aa13.18□□□□□ -0.3
NPLOC4-218ENST00000574964 A0A1B0GTH9 108 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 CFAP73A6NFT4 308 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 TPST1O60507 370 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 HCN1O60741 890 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 BCAS1O75363 584 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 GCM2O75603 506 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 STAMBPO95630 424 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 IGHG3P01860 377 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 NCK1P16333 377 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ME2P23368 584 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 TDGF1P3P51864 188 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 RGS8P57771 180 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 COPZ1P61923 177 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 QPRTQ15274 297 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 CYBRD1Q53TN4 286 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ARHGAP11AQ6P4F7 1023 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ARSKQ6UWY0 536 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ZNF605Q86T29 641 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 GRAMD2AQ8IUY3 354 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 FAM71CQ8NEG0 241 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 GPR119Q8TDV5 335 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 LZICQ8WZA0 190 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 PROX1Q92786 737 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 SARAFQ96BY9 339 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ARSGQ96EG1 525 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 BARD1Q99728 777 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 MED17Q9NVC6 651 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 ADPRHL2Q9NX46 363 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 CD300AQ9UGN4 299 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 BAG5Q9UL15 447 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 SLC6A5Q9Y345 797 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 CHD6Q8TD26 2715 aa13.17□□□□□ -0.3
NPLOC4-218ENST00000574964 B4DXG7 233 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 FRS3O43559 492 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 SUSD5O60279 629 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 ZIC3O60481 467 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 WISP2O76076 250 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 ZNF682O95780 498 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 GP1BBP13224 206 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 ABOP16442 354 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 GGT1P19440 569 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 KCNJ5P48544 419 aa13.16□□□□□ -0.3
NPLOC4-218ENST00000574964 IDH2P48735 452 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms