RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 FMO6PO60774 539 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 TSPAN19P0C672 248 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 SAGP10523 405 aaPredicted RBP21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 CD1CP29017 333 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 S100A5P33763 92 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 SOX6P35712 828 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 SLC1A3P43003 542 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 OR1D5P58170 312 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 BNC1Q01954 994 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 ZNF791Q3KP31 576 aaPredicted RBP21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 PTCRAQ6ISU1 281 aaPredicted RBP21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 CXXC5Q7LFL8 322 aaKnown RBP21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 SIRT6Q8N6T7 355 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 CADM4Q8NFZ8 388 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 TM9SF2Q99805 663 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 TMEM27Q9HBJ8 222 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 TXNL4BQ9NX01 149 aaKnown RBP21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 MED31Q9Y3C7 131 aa21.83■■□□□ 1.09
NPLOC4-217ENST00000574897 HNRNPKP61978 463 aaKnown RBP eCLIP21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 C14orf28Q4W4Y0 310 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 C22orf42Q6IC83 251 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 RNF113BQ8IZP6 322 aaKnown RBP21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF321PQ8N8H1 164 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF559Q9BR84 538 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF649Q9BS31 505 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 OR10A5Q9H207 317 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 SSR3Q9UNL2 185 aa21.83■■□□□ 1.08
NPLOC4-217ENST00000574897 SMIM30A4D0T7 59 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF670-ZNF695F2Z2N8 137 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 CLEC2LP0C7M8 214 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 TGM1P22735 817 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 OR1D4P47884 311 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 SKP1P63208 163 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 SNAP47Q5SQN1 464 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 NXNL2Q5VZ03 156 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 CADM2Q8N3J6 435 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF485Q8NCK3 441 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 OR4C3Q8NH37 302 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 RFKQ969G6 155 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 CLIP3Q96DZ5 547 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 YIPF2Q9BWQ6 316 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 TEX12Q9BXU0 123 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 SIGLEC7Q9Y286 467 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 MRPS17Q9Y2R5 130 aaKnown RBP21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 EXOSC1Q9Y3B2 195 aaKnown RBP21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 A0A0C4DFX4 3053 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 RHPN2P1A8MT19 583 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 HNRNPCP07910 306 aaKnown RBP eCLIP21.82■■□□□ 1.083e-6■■■□□ 18.5
NPLOC4-217ENST00000574897 COL13A1Q5TAT6 717 aaPredicted RBP21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF613Q6PF04 617 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 LAPTM4BQ86VI4 370 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 SYT14Q8NB59 555 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 OR51G2Q8NGK0 314 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 CHRDQ9H2X0 955 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 MED17Q9NVC6 651 aa21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 SF3B6Q9Y3B4 125 aaKnown RBP21.82■■□□□ 1.08
NPLOC4-217ENST00000574897 BOLA2-SMG1P6H3BVE0 249 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 PRAMEF2O60811 474 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 UPK1BO75841 260 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 CLPSP04118 112 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 HTR1FP30939 366 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 BCAP31P51572 246 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 GARNL3Q5VVW2 1013 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 TTLL10Q6ZVT0 673 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF554Q86TJ5 538 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 SLC22A16Q86VW1 577 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 OR52L1Q8NGH7 329 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 A8MUA0 341 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 CHP2O43745 196 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 PIAS2O75928 621 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 HMGN1P05114 100 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 BMP7P18075 431 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 CFHR1Q03591 330 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 ALG10BQ5I7T1 473 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 OGFOD3Q6PK18 319 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 KIRREL2Q6UWL6 708 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 TMPRSS11FQ6ZWK6 438 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 BMP8AQ7Z5Y6 402 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 LYSMD2Q8IV50 215 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 BCORP1Q8N888 145 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 ZNF615Q8N8J6 731 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 PMM1Q92871 262 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 SECISBP2Q96T21 854 aaKnown RBP21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 ARHGAP9Q9BRR9 750 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 IFT27Q9BW83 186 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 Q9N2J8 555 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 OR10H1Q9Y4A9 318 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 PEX16Q9Y5Y5 336 aa21.81■■□□□ 1.08
NPLOC4-217ENST00000574897 WDR87Q6ZQQ6 2873 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 IRGMA1A4Y4 181 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 NPIPB9F8W1W9 429 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 TAF4O00268 1085 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 CDRT1O95170 752 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 ALAS2P22557 587 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 ATP6V1E1P36543 226 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 STARD6P59095 220 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 RAB15P59190 212 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 FGFBP1Q14512 234 aa21.8■■□□□ 1.08
NPLOC4-217ENST00000574897 GDPGP1Q6ZNW5 385 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms