RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 RAB5BP61020 215 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 SORDQ00796 357 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 LMAN2Q12907 356 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 GPR33Q49SQ1 333 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 LIN54Q6MZP7 749 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 NHLRC1Q6VVB1 395 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 RFLNAQ6ZTI6 216 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 SVBPQ8N300 66 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 HORMAD2Q8N7B1 307 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 OR52L1Q8NGH7 329 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 KCTD12Q96CX2 325 aaKnown RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 CPNE2Q96FN4 548 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF558Q96NG5 402 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 POLMQ9NP87 494 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 SLC22A11Q9NSA0 550 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 KLHL28Q9NXS3 571 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ZDHHC3Q9NYG2 299 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ABHD14A-ACY1A0A1B0GW23 586 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 LINC00587B1AMM8 73 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 F5H5P2 479 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 FFAR1O14842 300 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 MT-ND5P03915 603 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 CTSAP10619 480 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 B4GALNT1Q00973 533 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 MESP2Q0VG99 397 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 SLC25A35Q3KQZ1 300 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 GGTA1PQ4G0N0 100 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 HACD4Q5VWC8 232 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF600Q6ZNG1 722 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 OR5W2Q8NH69 310 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 FCAMRQ8WWV6 532 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM38AQ9H6F2 299 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 EQTNQ9NQ60 294 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 BABAM2Q9NXR7 383 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ASF1AQ9Y294 204 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 TRBV5-4A0A0C4DH59 114 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 OR5K4A6NMS3 321 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 OR2AT4A6NND4 320 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ERAL1O75616 437 aaKnown RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 KRT33AO76009 404 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 FARS2O95363 451 aaKnown RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 DRD2P14416 443 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 UQCRC2P22695 453 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 FAUP35544 74 aaKnown RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 HAAOP46952 286 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 LSM11P83369 360 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ACSM3Q53FZ2 586 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 HSD17B13Q7Z5P4 300 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 TECPR1Q7Z6L1 1165 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 WDR48Q8TAF3 677 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 YIPF5Q969M3 257 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 C7orf50Q9BRJ6 194 aaKnown RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 PLA2G12AQ9BZM1 189 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 SLC19A3Q9BZV2 496 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ZCCHC3Q9NUD5 404 aaKnown RBP8.94□□□□□ -0.98
CCDC40-212ENST00000574799 ASB6Q9NWX5 421 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 NTMQ9P121 344 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 COL6A3P12111 3177 aa8.94□□□□□ -0.98
CCDC40-212ENST00000574799 GPR31O00270 319 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SOCS6O14544 535 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 UBXN7O94888 489 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 GIPP09681 153 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 HNF1BP35680 557 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 KCNJ3P48549 501 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 CCR8P51685 355 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF234Q14588 700 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 MELKQ14680 651 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 TMEM44Q2T9K0 475 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 HES5Q5TA89 166 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 MACC1Q6ZN28 852 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 C6orf120Q7Z4R8 191 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 TMED4Q7Z7H5 227 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 CBLN2Q8IUK8 224 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 OR5D16Q8NGK9 328 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 ECHDC3Q96DC8 303 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 ISG20L2Q9H9L3 353 aaKnown RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 WBP1LQ9NX94 342 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 AHSPQ9NZD4 102 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SPG21Q9NZD8 308 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 A0A0G2JN53 185 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 A0A1W2PRU2 124 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 YKT6O15498 198 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 ACP5P13686 325 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SERPINA4P29622 427 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 GCGRP47871 477 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 TMPRSS9Q7Z410 1059 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 VRK3Q8IV63 474 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 LMNTD1Q8N9Z9 388 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 BPIFCQ8NFQ6 507 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 OR52B4Q8NGK2 314 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 ZNF354BQ96LW1 612 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 BBS4Q96RK4 519 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SF3B6Q9Y3B4 125 aaKnown RBP8.93□□□□□ -0.98
CCDC40-212ENST00000574799 SUSD5O60279 629 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 HSD3B1P14060 373 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 IRS1P35568 1242 aa8.93□□□□□ -0.98
CCDC40-212ENST00000574799 PREPP48147 710 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms