RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 BMP7P18075 431 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 WASP42768 502 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TSFMP43897 325 aaKnown RBP17.69■□□□□ 0.42
SCARF1-206ENST00000573852 OR12D2P58182 307 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 FOXK2Q01167 660 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 RNASE12Q5GAN4 147 aaKnown RBP17.69■□□□□ 0.42
SCARF1-206ENST00000573852 C1orf53Q5VUE5 145 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TBC1D3GQ6DHY5 549 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 SIGIRRQ6IA17 410 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF425Q6IV72 752 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 MTSS1LQ765P7 747 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF655Q8N720 491 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-206ENST00000573852 TMEM239Q8WW34 195 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 C4orf36Q96KX1 117 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 KLHL1Q9NR64 748 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF222Q9UK12 451 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 MGAT4AQ9UM21 535 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 CLEC4AQ9UMR7 237 aa17.69■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF888P0CJ79 500 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-206ENST00000573852 STOMP27105 288 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 CTNNB1P35222 781 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 DUSP8Q13202 625 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 ARHGEF6Q15052 776 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 OR1Q1Q15612 314 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 ZBTB37Q5TC79 503 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 PYHIN1Q6K0P9 492 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 LYPD4Q6UWN0 246 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 VN1R4Q7Z5H5 301 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 PXKQ7Z7A4 578 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 TPRA1Q86W33 373 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 OR11H4Q8NGC9 324 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 OR13C5Q8NGS8 318 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 OR13C2Q8NGS9 318 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF431Q8TF32 576 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-206ENST00000573852 GPR137Q96N19 417 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 CMC2Q9NRP2 79 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 STMN3Q9NZ72 180 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 FBXL4Q9UKA2 621 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 ING4Q9UNL4 249 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 CDH23Q9H251 3354 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 GPR89AB7ZAQ6 455 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 PRR23D1E9PI22 279 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-206ENST00000573852 DNAJB6O75190 326 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 SC5DO75845 299 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 CD3GP09693 182 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 GPR89BP0CG08 455 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 PRR23D2P0DMB1 279 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-206ENST00000573852 CXCL3P19876 107 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 SDHBP21912 280 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF85Q03923 595 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 RPE65Q16518 533 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 FAM78AQ5JUQ0 283 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 SPRED2Q7Z698 418 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 RANBP3LQ86VV4 465 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-206ENST00000573852 PGLYRP3Q96LB9 341 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 TIMM29Q9BSF4 260 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 IFT27Q9BW83 186 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 DPAGT1Q9H3H5 408 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 CACYBPQ9HB71 228 aaKnown RBP17.68■□□□□ 0.42
SCARF1-206ENST00000573852 FBXO34Q9NWN3 711 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 KCNE5Q9UJ90 142 aa17.68■□□□□ 0.42
SCARF1-206ENST00000573852 NPIPA5A0A0B4J1W7 369 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 NPIPA7E9PJI5 369 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 TCRBP04435 133 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 CEACAM5P06731 702 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 NPIPA8P0DM63 369 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 CMPK1P30085 196 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 PER3P56645 1201 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ESCO2Q56NI9 601 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 OR2L13Q8N349 312 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ADGRL4Q9HBW9 690 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 PHPT1Q9NRX4 125 aaPredicted RBP17.67■□□□□ 0.42
SCARF1-206ENST00000573852 B3GNT2Q9NY97 397 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 A0A0B4J203 849 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 CDHR4A6H8M9 788 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 PRR23AA6NEV1 266 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 SLC22A31A6NKX4 558 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 MEN1O00255 615 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 SYPP08247 313 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 SBK2P0C263 348 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 CD53P19397 219 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 SIM1P81133 766 aaPredicted RBP17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ANGPT1Q15389 498 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ACSM3Q53FZ2 586 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 TRMT12Q53H54 448 aaKnown RBP17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ZNF782Q6ZMW2 699 aaPredicted RBP17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ASPGQ86U10 573 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 CYB561A3Q8NBI2 242 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 OR5J2Q8NH18 312 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 YIPF5Q969M3 257 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 SMAD5Q99717 465 aaKnown RBP17.67■□□□□ 0.42
SCARF1-206ENST00000573852 ERVMER34-1Q9H9K5 563 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 EMC7Q9NPA0 242 aa17.67■□□□□ 0.42
SCARF1-206ENST00000573852 TEX13CA0A0J9YWL9 993 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 FAM86C2PA6NEL3 165 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 PRR19A6NJB7 356 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 AGR2O95994 175 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 GIFP27352 417 aa17.66■□□□□ 0.42
SCARF1-206ENST00000573852 EIPR1Q53HC9 387 aa17.66■□□□□ 0.42
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