RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MAGEA8P43361 318 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 MVDP53602 400 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 RPS3AP61247 264 aaKnown RBP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TFF3Q07654 80 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 SF3A3Q12874 501 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 FOXF1Q12946 379 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TOMM34Q15785 309 aaPredicted RBP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 MEX3BQ6ZN04 569 aaKnown RBP18.63■□□□□ 0.57
CHMP6-204ENST00000572778 LRRC74BQ6ZQY2 392 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 OR5W2Q8NH69 310 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 GPR119Q8TDV5 335 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TMEM120AQ9BXJ8 343 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 PINK1Q9BXM7 581 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 LAT2Q9GZY6 243 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 SLC38A1Q9H2H9 487 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TMEM185BQ9H7F4 350 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 FGFR1OP2Q9NVK5 253 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 TMEM45AQ9NWC5 275 aa18.63■□□□□ 0.57
CHMP6-204ENST00000572778 SLC22A20A6NK97 555 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 CLIC1O00299 241 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 EIF1AYO14602 144 aaKnown RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 TGM6O95932 706 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 CD1EP15812 388 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 ME2P23368 584 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 PSMA4P25789 261 aaKnown RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 EIF1P41567 113 aaKnown RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 DSTNP60981 165 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 SKP2Q13309 424 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 CBFBQ13951 182 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 FGFBP1Q14512 234 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 SGCBQ16585 318 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 PAGE3Q5JUK9 113 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 AP1ARQ63HQ0 302 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 GGNQ86UU5 652 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 RELL2Q8NC24 303 aaPredicted RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 FBXO27Q8NI29 283 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 OIT3Q8WWZ8 545 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 FIG4Q92562 907 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 INTS12Q96CB8 462 aaKnown RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 THUMPD3Q9BV44 507 aaKnown RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 MTHFD2LQ9H903 347 aaPredicted RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 SLC52A3Q9NQ40 469 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 NPDC1Q9NQX5 325 aaPredicted RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 P2RX2Q9UBL9 471 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 SLC35A3Q9Y2D2 325 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 GPC6Q9Y625 555 aaPredicted RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 PHF3Q92576 2039 aaKnown RBP18.62■□□□□ 0.57
CHMP6-204ENST00000572778 MED12Q93074 2177 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 NBPF19A0A087WUL8 3843 aa18.62■□□□□ 0.57
CHMP6-204ENST00000572778 RCBTB2O95199 551 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 OPRM1P35372 400 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 EIF1AXP47813 144 aaKnown RBP18.61■□□□□ 0.57
CHMP6-204ENST00000572778 RAC1P63000 192 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 FOXF2Q12947 444 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 PPP4R4Q6NUP7 873 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 MCEMP1Q8IX19 187 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 GCNT2Q8N0V5 402 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 ARSGQ96EG1 525 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 ZNF845Q96IR2 970 aaPredicted RBP18.61■□□□□ 0.57
CHMP6-204ENST00000572778 ZFP3Q96NJ6 502 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 SPOCK3Q9BQ16 436 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 ENKD1Q9H0I2 346 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 RAD21L1Q9H4I0 556 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 SLAMF8Q9P0V8 285 aa18.61■□□□□ 0.57
CHMP6-204ENST00000572778 A0A1W2PP18 115 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 TMEM247A6NEH6 219 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 CLDN24A6NM45 220 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 BCHEP06276 602 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 PRKCAP17252 672 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 IL11P20809 199 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 ADH6P28332 368 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 PGM1P36871 562 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 KCNJ10P78508 379 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 PON3Q15166 354 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 QPRTQ15274 297 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 RGNQ15493 299 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 LRIF1Q5T3J3 769 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 POMZP3Q6PJE2 187 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 LILRA2Q8N149 483 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 METTL25Q8N6Q8 603 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 THUMPD1Q9NXG2 353 aaKnown RBP18.6■□□□□ 0.57
CHMP6-204ENST00000572778 SLC25A37Q9NYZ2 338 aa18.6■□□□□ 0.57
CHMP6-204ENST00000572778 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 AGAP5A6NIR3 686 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 EEF1E1-BLOC1S5C9J1V9 151 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 EEF1E1O43324 174 aaKnown RBP18.59■□□□□ 0.57
CHMP6-204ENST00000572778 BCAS1O75363 584 aaPredicted RBP18.59■□□□□ 0.57
CHMP6-204ENST00000572778 IL18BPO95998 194 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 TFPTP0C1Z6 253 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 IL7RP16871 459 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 HOXB9P17482 250 aaPredicted RBP18.59■□□□□ 0.57
CHMP6-204ENST00000572778 PGCP20142 388 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 SFTPDP35247 375 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 ARFIP2P53365 341 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 GNA13Q14344 377 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 MAPK11Q15759 364 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 METTL21CQ5VZV1 264 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 ATP6V1C2Q8NEY4 427 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 OR10D3Q8NH80 312 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms