RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DGCR2P98153 550 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 FOXM1Q08050 763 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 NPRL3Q12980 569 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 CUL3Q13618 768 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 TSTA3Q13630 321 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-222ENST00000570139 RCAN2Q14206 197 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 NUMA1Q14980 2115 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 MEP1AQ16819 746 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 SLC5A12Q1EHB4 618 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 DUS1LQ6P1R4 473 aaKnown RBP6.54□□□□□ -1.36
CNOT1-222ENST00000570139 FAM198BQ6UWH4 519 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 TMIGD1Q6UXZ0 262 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 Q6ZSR9 355 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 LCNL1Q6ZST4 164 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 PAGE2Q7Z2X7 111 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 OOSP2Q86WS3 158 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 LMNTD1Q8N9Z9 388 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 TEX45Q8NA69 505 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 PPFIBP2Q8ND30 876 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 TRPV3Q8NET8 790 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 OR6C4Q8NGE1 309 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 TMEM163Q8TC26 289 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 UTP15Q8TED0 518 aaKnown RBP6.54□□□□□ -1.36
CNOT1-222ENST00000570139 MIB2Q96AX9 1013 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF503Q96F45 646 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 FCRL1Q96LA6 429 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 QRFPRQ96P65 431 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 LRRC61Q9BV99 259 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 ACPTQ9BZG2 426 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 WNT5BQ9H1J7 359 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 SRMSQ9H3Y6 488 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 MRPS30Q9NP92 439 aaKnown RBP6.54□□□□□ -1.36
CNOT1-222ENST00000570139 GID8Q9NWU2 228 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 CNIH4Q9P003 139 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 TAC3Q9UHF0 121 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 BCAP29Q9UHQ4 241 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 PRPF19Q9UMS4 504 aaKnown RBP6.54□□□□□ -1.36
CNOT1-222ENST00000570139 NDUFAF1Q9Y375 327 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 KLK4Q9Y5K2 254 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 FANCMQ8IYD8 2048 aa6.54□□□□□ -1.36
CNOT1-222ENST00000570139 C15orf38-AP3S2A0A0A6YYH1 394 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 A0A1W2PP18 115 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 A0A1W2PPV9 198 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ANKDD1BA6NHY2 528 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 STMND1H3BQB6 276 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CLDN4O14493 209 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ANGPT2O15123 496 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CFLARO15519 480 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ALPPL2P10696 532 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CDH1P12830 882 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 NQO1P15559 274 aaKnown RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 AMD1P17707 334 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CD22P20273 847 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 PRPS1L1P21108 318 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 BCKDHBP21953 392 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 IL10P22301 178 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 KHKP50053 298 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 HNRNPFP52597 415 aaKnown RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 RPS15AP62244 130 aaKnown RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 SNRPEP62304 92 aaKnown RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CSNK2A1P68400 391 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CSTF1Q05048 431 aaKnown RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 TGM3Q08188 693 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ART3Q13508 389 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 GPR18Q14330 331 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 TMEM35AQ53FP2 167 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 AGKQ53H12 422 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 C6orf10Q5SRN2 563 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 TMEM26Q6ZUK4 368 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ARPINQ7Z6K5 226 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 C10orf67Q8IYJ2 551 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 DSELQ8IZU8 1212 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 PGAM4Q8N0Y7 254 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 NATD1Q8N6N6 113 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 LINC01555Q8NAE3 123 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF548Q8NEK5 533 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CSNK2A3Q8NEV1 391 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 OR2L3Q8NG85 312 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 OR2A1Q8NGT9 310 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 OR2T11Q8NH01 316 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 BBS10Q8TAM1 723 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 SLC37A2Q8TED4 501 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 SLAMF9Q96A28 289 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 TESCQ96BS2 214 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 MTERF3Q96E29 417 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 IL17FQ96PD4 163 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 HOPXQ9BPY8 73 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 DUSP26Q9BV47 211 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 KATNB1Q9BVA0 655 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ROGDIQ9GZN7 287 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 TOR3AQ9H497 397 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 CCDC167Q9P0B6 97 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF624Q9P2J8 865 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 RAPGEFL1Q9UHV5 662 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 AP3M1Q9Y2T2 418 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 TMEM184BQ9Y519 407 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-222ENST00000570139 DOCK9Q9BZ29 2069 aa6.53□□□□□ -1.36
CNOT1-222ENST00000570139 KRT87PA6NCN2 255 aa6.52□□□□□ -1.37
CNOT1-222ENST00000570139 TRIM77I1YAP6 450 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms