RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 AP1ARQ63HQ0 302 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 FRRS1Q6ZNA5 592 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF621Q6ZSS3 439 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 MSANTD1Q6ZTZ1 278 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 MIER2Q8N344 545 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 FNDC9Q8TBE3 224 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 GPR119Q8TDV5 335 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 CKAP2Q8WWK9 683 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF524Q96C55 264 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 LURAP1Q96LR2 239 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 KCNN3Q9UGI6 736 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 WDR45Q9Y484 360 aa11.72□□□□□ -0.53
CNOT1-220ENST00000569916 FAM234BA2RU67 622 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.53
CNOT1-220ENST00000569916 EIF4E2O60573 245 aaKnown RBP11.71□□□□□ -0.53
CNOT1-220ENST00000569916 NTN1O95631 604 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 NUDT14O95848 222 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 CRHP06850 196 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 ZCCHC18P0CG32 403 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 PRKCAP17252 672 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 ELK4P28324 431 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 SHC1P29353 583 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 EIF1P41567 113 aaKnown RBP11.71□□□□□ -0.53
CNOT1-220ENST00000569916 MVDP53602 400 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 AQP5P55064 265 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 KRTAP10-9P60411 292 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 TXNL4AP83876 142 aaKnown RBP11.71□□□□□ -0.53
CNOT1-220ENST00000569916 GTDC1Q4AE62 458 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 COX20Q5RI15 118 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 OR2A2Q6IF42 318 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF619Q8N2I2 560 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 TMCO5AQ8N6Q1 288 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 FAM71CQ8NEG0 241 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 TOR1AIP2Q8NFQ8 470 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 OR5W2Q8NH69 310 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 OR10D3Q8NH80 312 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 RFWD2Q8NHY2 731 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 FBXO27Q8NI29 283 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 PNPT1Q8TCS8 783 aaKnown RBP11.71□□□□□ -0.53
CNOT1-220ENST00000569916 ZFP90Q8TF47 636 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 OIT3Q8WWZ8 545 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 VPS33AQ96AX1 596 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 ARSGQ96EG1 525 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 LRRC46Q96FV0 321 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 MAGEB18Q96M61 343 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 CCDC28BQ9BUN5 200 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 TMEM185BQ9H7F4 350 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 RNF122Q9H9V4 155 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 MCCC2Q9HCC0 563 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 STOML1Q9UBI4 398 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 PACSIN3Q9UKS6 424 aa11.71□□□□□ -0.53
CNOT1-220ENST00000569916 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
CNOT1-220ENST00000569916 CSMD1Q96PZ7 3565 aa11.71□□□□□ -0.54
CNOT1-220ENST00000569916 CSMD2Q7Z408 3487 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 A0A0J9YW62 118 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ETV2O00321 342 aaPredicted RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 TNFSF11O14788 317 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ADAMDEC1O15204 470 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 EFNA2O43921 213 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 DNAJA2O60884 412 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 BCAS1O75363 584 aaPredicted RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 AQP8O94778 261 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 H6PDO95479 791 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 CSTAP01040 98 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 OPN1LWP04000 364 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 CHRM4P08173 479 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ME2P23368 584 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ADH6P28332 368 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 PEX19P40855 299 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 EIF1AXP47813 144 aaKnown RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 CCR4P51679 360 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 STX1BP61266 288 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 EEF1A1P68104 462 aaKnown RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 HPCAP84074 193 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 PLAURQ03405 335 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 CHRNEQ04844 493 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 MYBPHQ13203 477 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 QPRTQ15274 297 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 GUSBP1Q15486 140 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 SYPL1Q16563 259 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 SGCBQ16585 318 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 GPAT3Q53EU6 434 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 EEF1A1P5Q5VTE0 462 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 FUNDC1Q8IVP5 155 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ANKFN1Q8N957 763 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ZG16BQ96DA0 208 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ITCHQ96J02 903 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 MRGPRX4Q96LA9 322 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 KLHL15Q96M94 604 aa11.7□□□□□ -0.54
CNOT1-220ENST00000569916 TRNT1Q96Q11 434 aaKnown RBP11.7□□□□□ -0.54
CNOT1-220ENST00000569916 ZNF559Q9BR84 538 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms