RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PLEKHS1Q5SXH7 462 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CCNYL2Q5T2Q4 361 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 SPRED2Q7Z698 418 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CENPLQ8N0S6 344 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 TEX29Q8N6K0 151 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ZNF511Q8NB15 262 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ZNF778Q96MU6 729 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 LPAR4Q99677 370 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 WDR77Q9BQA1 342 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 RIOK2Q9BVS4 552 aaKnown RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 ERVK-6Q9BXR3 956 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TAAR2Q9P1P5 351 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 MGAT4BQ9UQ53 548 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 FARSAQ9Y285 508 aaKnown RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 NPIPA5A0A0B4J1W7 369 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 A0A1W2PRB8 838 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 PRSS38A1L453 326 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 SLC35F4A4IF30 521 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 GLOD5A6NK44 160 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZNF487B1APH4 448 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 NPIPA5E9PKD4 350 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 NPIPA3F8WFD2 350 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 SNNO75324 88 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 KDM4BO94953 1096 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 IGLV3-19P01714 112 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 NUDT7P0C024 238 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 THRAP10827 490 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZNF8P17098 575 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 PSMB4P28070 264 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 MAP2K4P45985 399 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 GLRBP48167 497 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TGM4P49221 684 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 HSD11B2P80365 405 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ATP6AP1Q15904 470 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 BAK1Q16611 211 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 VPS26BQ4G0F5 336 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZNF691Q5VV52 312 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 CAPN13Q6MZZ7 669 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 FIGLAQ6QHK4 219 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 Q6ZNB5 142 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TTLL10Q6ZVT0 673 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 HIPK1Q86Z02 1210 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 BVESQ8NE79 360 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ACVR1CQ8NER5 493 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 OR13H1Q8NG92 308 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TCP10LQ8TDR4 215 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 NR4A3Q92570 626 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 GLYATL1Q969I3 302 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 LDAHQ9H6V9 325 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 MMP25Q9NPA2 562 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 MED17Q9NVC6 651 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZDHHC3Q9NYG2 299 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 VAPAQ9P0L0 249 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ABCD2Q9UBJ2 740 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 NPIPA1Q9UND3 350 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 PLEKHA6Q9Y2H5 1048 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 CHD5Q8TDI0 1954 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 RP1L1Q8IWN7 2480 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 FAM149AA5PLN7 773 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FAM172BPA6NC97 362 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 EVPLLA8MZ36 301 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 K7EQS6 105 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 PPM1DO15297 605 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 LDB2O43679 373 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 PRICKLE3O43900 615 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 SRPX2O60687 465 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 FCARP24071 287 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 S100PP25815 95 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 MAGEA6P43360 314 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 AP1S2P56377 157 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FOLH1Q04609 750 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 KIR2DS3Q14952 304 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FAM219BQ5XKK7 198 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ADAMTSL4Q6UY14 1074 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 MED25Q71SY5 747 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 OR4D9Q8NGE8 314 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 OR13F1Q8NGS4 319 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 OR6K2Q8NGY2 324 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 PIWIL2Q8TC59 973 aaKnown RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 SORCS1Q8WY21 1168 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TMEM45BQ96B21 275 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 SCRN2Q96FV2 425 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZNF354BQ96LW1 612 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 CNTNAP3BQ96NU0 1288 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TBL1YQ9BQ87 522 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZNF559Q9BR84 538 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 CNTNAP3Q9BZ76 1288 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZNF430Q9H8G1 570 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 FGFR1OP2Q9NVK5 253 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 GPR83Q9NYM4 423 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 DKK4Q9UBT3 224 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FBXL17Q9UF56 701 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 STOML2Q9UJZ1 356 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 POLR3HQ9Y535 204 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 KIAA1671Q9BY89 1806 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FAM25AB3EWG3 89 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FAM25CB3EWG5 89 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 FAM25GB3EWG6 89 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 H3BNH8 94 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms