RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 ADGRG7Q96K78 797 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 MARK4Q96L34 752 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 RNF145Q96MT1 663 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 TIGARQ9NQ88 270 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
SPG7-221ENST00000569720 MED17Q9NVC6 651 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 BAIAP2L1Q9UHR4 511 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 ZDHHC2Q9UIJ5 367 aa11.75□□□□□ -0.53
SPG7-221ENST00000569720 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
SPG7-221ENST00000569720 LSM1O15116 133 aaKnown RBP11.74□□□□□ -0.53
SPG7-221ENST00000569720 ADAMDEC1O15204 470 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 ITM2AO43736 263 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 SOX30O94993 753 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 LY6G6DO95868 133 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 OPN1LWP04000 364 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 CHRNGP07510 517 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 ATP6V1C1P21283 382 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 LOXP28300 417 aaPredicted RBP11.74□□□□□ -0.53
SPG7-221ENST00000569720 CARD18P57730 90 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 GNGT1P63211 74 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
SPG7-221ENST00000569720 MLC1Q15049 377 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
SPG7-221ENST00000569720 UGT3A2Q3SY77 523 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 METTL21CQ5VZV1 264 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 STAC2Q6ZMT1 411 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 ZNF527Q8NB42 609 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 NUDT8Q8WV74 236 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 TMEM171Q8WVE6 324 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 OSTF1Q92882 214 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 C16orf58Q96GQ5 468 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 KLHL15Q96M94 604 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 STACQ99469 402 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 BTBD2Q9BX70 525 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 C20orf27Q9GZN8 174 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 OR10A4Q9H209 315 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 TMEM185BQ9H7F4 350 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 DUSP22Q9NRW4 184 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 GPR52Q9Y2T5 361 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 DNAJC15Q9Y5T4 150 aa11.74□□□□□ -0.53
SPG7-221ENST00000569720 NUP214P35658 2090 aaPredicted RBP11.74□□□□□ -0.53
SPG7-221ENST00000569720 A0A0J9YW62 118 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 GJE1A6NN92 205 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 H3BNH8 94 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 KLF4O43474 513 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 TMCC2O75069 709 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 NUDT14O95848 222 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 HMGN2P05204 90 aaKnown RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 THBDP07204 575 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 KRT16P08779 473 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 BCKDHAP12694 445 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 PSMA4P25789 261 aaKnown RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 ELK4P28324 431 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 LASP1Q14847 261 aaKnown RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 TMEM201Q5SNT2 666 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 CCNJQ5T5M9 372 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 ZNF704Q6ZNC4 412 aaPredicted RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 C22orf34Q6ZV56 151 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 CPLX4Q7Z7G2 160 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 ZAR1Q86SH2 424 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 WFDC8Q8IUA0 241 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 LILRA2Q8N149 483 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 NATD1Q8N6N6 113 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 ZNF781Q8N8C0 355 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 PHOSPHO1Q8TCT1 267 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 TWIST2Q8WVJ9 160 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 ARSGQ96EG1 525 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 FAM120BQ96EK7 910 aaKnown RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 PPP3R2Q96LZ3 170 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 TACO1Q9BSH4 297 aaKnown RBP11.73□□□□□ -0.53
SPG7-221ENST00000569720 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 HOXD1Q9GZZ0 328 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 TUBB1Q9H4B7 451 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 CXorf56Q9H5V9 222 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 C12orf49Q9H741 205 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 MEAF6Q9HAF1 191 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 FBXO34Q9NWN3 711 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 GIN1Q9NXP7 522 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 KLHL14Q9P2G3 628 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 ATP6V1HQ9UI12 483 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 TLN2Q9Y4G6 2542 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 SNX8Q9Y5X2 465 aa11.73□□□□□ -0.53
SPG7-221ENST00000569720 GOLGA8QA0A0J9YX86 632 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 GOLGA8OA6NCC3 632 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 GOLGA8NF8WBI6 632 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 SCAMP2O15127 329 aaKnown RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 LINGO3P0C6S8 592 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 PSMB1P20618 241 aaKnown RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 EFNA1P20827 205 aaPredicted RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 ADH6P28332 368 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 AGTR1P30556 359 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 ARRB2P32121 409 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 SFTPDP35247 375 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 PTH2RP49190 550 aa11.72□□□□□ -0.53
SPG7-221ENST00000569720 RNPS1Q15287 305 aaKnown RBP11.72□□□□□ -0.53
SPG7-221ENST00000569720 LSM12Q3MHD2 195 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms