RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 KLHL26Q53HC5 615 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 ANXA8L1Q5VT79 327 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 C6orf120Q7Z4R8 191 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 BTLAQ7Z6A9 289 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 ZNF614Q8N883 585 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 VPS37AQ8NEZ2 397 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 OR5D16Q8NGK9 328 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 OR2V1Q8NHB1 315 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 NINJ1Q92982 152 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 TESCQ96BS2 214 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 NPAS1Q99742 590 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 KLHDC3Q9BQ90 382 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 OPN3Q9H1Y3 402 aaPredicted RBP12.97□□□□□ -0.33
CMTM3-215ENST00000568477 TMEM185BQ9H7F4 350 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 MEAF6Q9HAF1 191 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 NDRG3Q9UGV2 375 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 MCTS1Q9ULC4 181 aaKnown RBP12.97□□□□□ -0.33
CMTM3-215ENST00000568477 CARD8Q9Y2G2 431 aa12.97□□□□□ -0.33
CMTM3-215ENST00000568477 PRSS51A0A1B0GVH4 220 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 NPIPB9F8W1W9 429 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 GTPBP1O00178 669 aaKnown RBP12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ANKRD28O15084 1053 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ADAMDEC1O15204 470 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 OIP5O43482 229 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 CXCL13O43927 109 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 SNNO75324 88 aaPredicted RBP12.96□□□□□ -0.33
CMTM3-215ENST00000568477 AQP8O94778 261 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 SYNGR4O95473 234 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 CPSF4O95639 269 aaKnown RBP12.96□□□□□ -0.33
CMTM3-215ENST00000568477 LINGO3P0C6S8 592 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ELK4P28324 431 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 CD79BP40259 229 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 PCYT1AP49585 367 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 P2RX1P51575 399 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 IST1P53990 364 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 FOXF1Q12946 379 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 CTU2Q2VPK5 515 aaKnown RBP12.96□□□□□ -0.33
CMTM3-215ENST00000568477 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
CMTM3-215ENST00000568477 PDSS1Q5T2R2 415 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 OGFOD2Q6N063 350 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ESPNLQ6ZVH7 1005 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ANKRD46Q86W74 232 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 CLEC4FQ8N1N0 589 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 OR10D3Q8NH80 312 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 POC1BQ8TC44 478 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ADGRG7Q96K78 797 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 SDF2Q99470 211 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 SLC39A3Q9BRY0 314 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 SERHL2Q9H4I8 314 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 THAP1Q9NVV9 213 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 ST6GALNAC2Q9UJ37 374 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 PROCRQ9UNN8 238 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 EMC9Q9Y3B6 208 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
CMTM3-215ENST00000568477 HRNRQ86YZ3 2850 aaPredicted RBP12.96□□□□□ -0.34
CMTM3-215ENST00000568477 ITPR3Q14573 2671 aa12.96□□□□□ -0.34
CMTM3-215ENST00000568477 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 E9PBE3 544 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 SDHDO14521 159 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 CASKO14936 926 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 SCN2BO60939 215 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 AGR2O95994 175 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 PLGP00747 810 aaPredicted RBP12.95□□□□□ -0.34
CMTM3-215ENST00000568477 OPN1LWP04000 364 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 CD8BP10966 210 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 UBL4AP11441 157 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 UQCRC2P22695 453 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 DNASE1P24855 282 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 S100A3P33764 101 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 SLC6A8P48029 635 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 FAM27E3Q08E93 113 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 GUSBP1Q15486 140 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 NDUFAF6Q330K2 333 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 SPANXN4Q5MJ08 99 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 ATAD3BQ5T9A4 648 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 ZNF474Q6S9Z5 364 aaPredicted RBP12.95□□□□□ -0.34
CMTM3-215ENST00000568477 CBLN3Q6UW01 205 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 FAM214BQ7L5A3 538 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 C16orf62Q7Z3J2 963 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 LILRA2Q8N149 483 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 TMCO5AQ8N6Q1 288 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 CHDHQ8NE62 594 aaPredicted RBP12.95□□□□□ -0.34
CMTM3-215ENST00000568477 MIPOL1Q8TD10 442 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 KLHL15Q96M94 604 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 NMUR2Q9GZQ4 415 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 LIME1Q9H400 295 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 EXD2Q9NVH0 621 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 AIG1Q9NVV5 245 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 ELOVL5Q9NYP7 299 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 ICAM5Q9UMF0 924 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 TESMINQ9Y4I5 508 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
CMTM3-215ENST00000568477 USH1CQ9Y6N9 552 aa12.95□□□□□ -0.34
CMTM3-215ENST00000568477 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 A0A0J9YW62 118 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 SERINC4A6NH21 518 aa12.94□□□□□ -0.34
CMTM3-215ENST00000568477 TRPC5OSA6NMA1 111 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms