RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 FAM120BQ96EK7 910 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 STACQ99469 402 aa16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 HOXD1Q9GZZ0 328 aa16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 EML4Q9HC35 981 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 DUSP22Q9NRW4 184 aa16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 ZNF446Q9NWS9 450 aa16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 DNAJC15Q9Y5T4 150 aa16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 SNX8Q9Y5X2 465 aa16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 FN1P02751 2386 aaKnown RBP16.79■□□□□ 0.28
GTF3C1-207ENST00000567806 GJE1A6NN92 205 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 TMEM114B3SHH9 223 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 GTPBP1O00178 669 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 ZNF195O14628 629 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 HMGN2P05204 90 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 LINGO3P0C6S8 592 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 HPCAL1P37235 193 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 RPL3P39023 403 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 LASP1Q14847 261 aaKnown RBP16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 MLC1Q15049 377 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 CD226Q15762 336 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 PRIMA1Q86XR5 153 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 NUDCD3Q8IVD9 361 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 CDS1Q92903 461 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 CPNE4Q96A23 557 aaPredicted RBP16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 ARL8AQ96BM9 186 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 KLHDC3Q9BQ90 382 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 TMEM204Q9BSN7 226 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 PIGUQ9H490 435 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 NGBQ9NPG2 151 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 ATP6V1HQ9UI12 483 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 ROS1P08922 2347 aa16.78■□□□□ 0.28
GTF3C1-207ENST00000567806 JMJD1CQ15652 2540 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 INAFM1C9JVW0 142 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 PRKD3O94806 890 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 SOX30O94993 753 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 IL32P24001 234 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ELK4P28324 431 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ADH6P28332 368 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 MAPK1P28482 360 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ETV4P43268 484 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 FOXF1Q12946 379 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ZNF239Q16600 458 aaKnown RBP16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 TMEM176BQ3YBM2 270 aaPredicted RBP16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 KANK2Q63ZY3 851 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 TUSC5Q8IXB3 177 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ATP6V1C2Q8NEY4 427 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 FBXO27Q8NI29 283 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ADAMTS15Q8TE58 950 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 ABHD3Q8WU67 409 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 S100PBPQ96BU1 408 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 FAF1Q9UNN5 650 aaPredicted RBP16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 LAMP3Q9UQV4 416 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 TRAF6Q9Y4K3 522 aa16.77■□□□□ 0.28
GTF3C1-207ENST00000567806 HIVEP2P31629 2446 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 HEATR5AQ86XA9 2040 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 BPGMP07738 259 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 FGF4P08620 206 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 SHC1P29353 583 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 CCT3P49368 545 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 P2RX1P51575 399 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 RPS4XP62701 263 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 ZNF117Q03924 483 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 CAPRIN1Q14444 709 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 SPDYE7PQ495Y7 208 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 KLHL26Q53HC5 615 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 EXOSC6Q5RKV6 272 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 SFRP5Q5T4F7 317 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 ATG16L1Q676U5 607 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 CDC73Q6P1J9 531 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 NUFIP2Q7Z417 695 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 OR7A2PQ8NGA2 310 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 RNF128Q8TEB7 428 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 TWIST2Q8WVJ9 160 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 OR5P2Q8WZ92 322 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 HSD17B8Q92506 261 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 TRMT61AQ96FX7 289 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 PPP3R2Q96LZ3 170 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 ACTRT3Q9BYD9 372 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 ESRP2Q9H6T0 727 aaKnown RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 GP6Q9HCN6 339 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 SIRT3Q9NTG7 399 aaPredicted RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 CARD8Q9Y2G2 431 aa16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 GPC6Q9Y625 555 aaPredicted RBP16.76■□□□□ 0.27
GTF3C1-207ENST00000567806 KIAA1324LA8MWY0 1029 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 SCAMP2O15127 329 aaKnown RBP16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 CLOCKO15516 846 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 EFNA2O43921 213 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 NPHS1O60500 1241 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 CD3EP07766 207 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 YES1P07947 543 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 KRT16P08779 473 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 DHRS4L1P0CG22 281 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 LAMP1P11279 417 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 CREB1P16220 341 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 ATP12AP54707 1039 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 SUMO3P55854 103 aaPredicted RBP16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 PCLAFQ15004 111 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 TSC22D1Q15714 1073 aa16.75■□□□□ 0.27
GTF3C1-207ENST00000567806 LSM12Q3MHD2 195 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms