RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MED17Q9NVC6 651 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ELOVL5Q9NYP7 299 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 ST6GALNAC2Q9UJ37 374 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 MCTS1Q9ULC4 181 aaKnown RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 PCDHGB4Q9UN71 923 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 DTNAQ9Y4J8 743 aa4.3□□□□□ -1.72
CLK3-219ENST00000567805 GPC6Q9Y625 555 aaPredicted RBP4.3□□□□□ -1.72
CLK3-219ENST00000567805 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 UQCRHLA0A096LP55 91 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 NPIPA5A0A0B4J1W7 369 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TMEM120BA0PK00 339 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TRPC5OSA6NMA1 111 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GJE1A6NN92 205 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 E9PBE3 544 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 NPIPA7E9PJI5 369 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SLCO1B7G3V0H7 640 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GTPBP1O00178 669 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 TNFSF11O14788 317 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CASKO14936 926 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ANKRD28O15084 1053 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 HDAC3O15379 428 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ZNF264O43296 627 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 EIF4E2O60573 245 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 SCN2BO60939 215 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SS18L1O75177 396 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 ERLIN1O75477 346 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 STX11O75558 287 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 AQP8O94778 261 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SYNGR4O95473 234 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 NUDT14O95848 222 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 AGR2O95994 175 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PLGP00747 810 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 CGAP01215 116 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 RAF1P04049 648 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 HRGP04196 525 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GUSBP08236 651 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ALDOCP09972 364 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 PABPC4LP0CB38 370 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 NPIPA8P0DM63 369 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 UBL4AP11441 157 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 POU2F1P14859 743 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ZNF16P17020 682 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 IL11P20809 199 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 MATN1P21941 496 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 UQCRC2P22695 453 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 DNASE1P24855 282 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 UGT2B10P36537 528 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CD79BP40259 229 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 KCNJ5P48544 419 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 P2RX1P51575 399 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CTBP2P56545 445 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 RPS26P62854 115 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 SIRPAP78324 504 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TAGLNQ01995 201 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 FAM27E3Q08E93 113 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 LRRC74AQ0VAA2 488 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 FOXF1Q12946 379 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CBFBQ13951 182 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CASP8Q14790 479 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GPR68Q15743 365 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CTU2Q2VPK5 515 aaKnown RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 ARHGAP11BQ3KRB8 267 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SPANXN4Q5MJ08 99 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.29□□□□□ -1.72
CLK3-219ENST00000567805 ATAD3BQ5T9A4 648 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 HBMQ6B0K9 141 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GTF2IRD2BQ6EKJ0 949 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PPP4R4Q6NUP7 873 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ZNF474Q6S9Z5 364 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 CBLN3Q6UW01 205 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 PAMR1Q6UXH9 720 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 C16orf62Q7Z3J2 963 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SPATA19Q7Z5L4 167 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GTF2IRD2Q86UP8 949 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CLECL1Q8IZS7 167 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 LILRA2Q8N149 483 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TMCO5AQ8N6Q1 288 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TRIML2Q8N7C3 387 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ANKRD42Q8N9B4 389 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 OR4A15Q8NGL6 344 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 OR6K3Q8NGY3 331 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 OR5W2Q8NH69 310 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 OR2V1Q8NHB1 315 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 RAB3IL1Q8TBN0 382 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 POC1BQ8TC44 478 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 MIPOL1Q8TD10 442 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 GPR119Q8TDV5 335 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 OIT3Q8WWZ8 545 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 CPNE4Q96A23 557 aaPredicted RBP4.29□□□□□ -1.72
CLK3-219ENST00000567805 MBD6Q96DN6 1003 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ARSGQ96EG1 525 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SLC35G5Q96KT7 338 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 MRGPRX4Q96LA9 322 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 KLHL15Q96M94 604 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 ALPK1Q96QP1 1244 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 SDF2Q99470 211 aa4.29□□□□□ -1.72
CLK3-219ENST00000567805 NPAS1Q99742 590 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms