RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LINGO3P0C6S8 592 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 IL32P24001 234 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 PSMA4P25789 261 aaKnown RBP16.63■□□□□ 0.25
LINC01238-205ENST00000567549 AGTR1P30556 359 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 ALDH3A1P30838 453 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 SFTPDP35247 375 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 SLC6A8P48029 635 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 ATP12AP54707 1039 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 SELENBP1Q13228 472 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF239Q16600 458 aaKnown RBP16.63■□□□□ 0.25
LINC01238-205ENST00000567549 ANKRD34AQ69YU3 496 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 PPP1R14CQ8TAE6 165 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 RNF128Q8TEB7 428 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 OIT3Q8WWZ8 545 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 C16orf58Q96GQ5 468 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 MARK4Q96L34 752 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 C12orf65Q9H3J6 166 aaKnown RBP16.63■□□□□ 0.25
LINC01238-205ENST00000567549 ESRP2Q9H6T0 727 aaKnown RBP16.63■□□□□ 0.25
LINC01238-205ENST00000567549 TMEM185BQ9H7F4 350 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 KLHL9Q9P2J3 617 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 KLHL13Q9P2N7 655 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 PCDHGB4Q9UN71 923 aa16.63■□□□□ 0.25
LINC01238-205ENST00000567549 A0A0J9YW62 118 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 RRP9O43818 475 aaKnown RBP16.62■□□□□ 0.25
LINC01238-205ENST00000567549 PPP2R2BQ00005 443 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF117Q03924 483 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF844Q08AG5 666 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 CBFBQ13951 182 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 P2RY6Q15077 328 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 ETFDHQ16134 617 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 SMU1Q2TAY7 513 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 KLHL26Q53HC5 615 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 XKR7Q5GH72 579 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 EXOSC6Q5RKV6 272 aaKnown RBP16.62■□□□□ 0.25
LINC01238-205ENST00000567549 CCNJQ5T5M9 372 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 WFDC8Q8IUA0 241 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 KRTAP1-3Q8IUG1 177 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF611Q8N823 705 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF614Q8N883 585 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 OR7A2PQ8NGA2 310 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 NUDT8Q8WV74 236 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 TUBGCP3Q96CW5 907 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 C12orf49Q9H741 205 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 TMBIM4Q9HC24 238 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 SERINC1Q9NRX5 453 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 SIRT3Q9NTG7 399 aaPredicted RBP16.62■□□□□ 0.25
LINC01238-205ENST00000567549 DTNAQ9Y4J8 743 aa16.62■□□□□ 0.25
LINC01238-205ENST00000567549 HMGB1P1B2RPK0 211 aaPredicted RBP16.61■□□□□ 0.25
LINC01238-205ENST00000567549 H7C1Q1 480 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF195O14628 629 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 HS3ST1O14792 307 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 ZNF264O43296 627 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 CHRNGP07510 517 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 UBL4AP11441 157 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 PAX1P15863 534 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 PTH2RP49190 550 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 FOXF1Q12946 379 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 CD226Q15762 336 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 UGT3A2Q3SY77 523 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 KRT71Q3SY84 523 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 C6orf136Q5SQH8 315 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 AGBL2Q5U5Z8 902 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 IL23RQ5VWK5 629 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 C3orf33Q6P1S2 294 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 FCRLAQ7L513 359 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 TMCO5AQ8N6Q1 288 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 VPS37AQ8NEZ2 397 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 FBXO27Q8NI29 283 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 AGR3Q8TD06 166 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 ZFP90Q8TF47 636 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 TMEM234Q8WY98 164 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 HSD17B8Q92506 261 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 COQ8BQ96D53 544 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 TRMT61AQ96FX7 289 aaKnown RBP16.61■□□□□ 0.25
LINC01238-205ENST00000567549 PLPPR2Q96GM1 343 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 DUSP26Q9BV47 211 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 EXD2Q9NVH0 621 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 NOP53Q9NZM5 478 aaKnown RBP16.61■□□□□ 0.25
LINC01238-205ENST00000567549 LGALS13Q9UHV8 139 aa16.61■□□□□ 0.25
LINC01238-205ENST00000567549 SPIN1Q9Y657 262 aaPredicted RBP16.61■□□□□ 0.25
LINC01238-205ENST00000567549 KLF4O43474 513 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 YES1P07947 543 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 LAMP1P11279 417 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 SOAT1P35610 550 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 RAC3P60763 192 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 ZAR1Q86SH2 424 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 OR5W2Q8NH69 310 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 OR2W6PQ8NHA6 318 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 TCP10LQ8TDR4 215 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 KISS1RQ969F8 398 aaPredicted RBP16.6■□□□□ 0.25
LINC01238-205ENST00000567549 HS3ST6Q96QI5 342 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 NMUR2Q9GZQ4 415 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 ICAM5Q9UMF0 924 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 CARD8Q9Y2G2 431 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 RAI1Q7Z5J4 1906 aaPredicted RBP16.6■□□□□ 0.25
LINC01238-205ENST00000567549 HEATR5AQ86XA9 2040 aa16.6■□□□□ 0.25
LINC01238-205ENST00000567549 TMEM233B4DJY2 109 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 STX11O75558 287 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 C6orf47O95873 294 aa16.59■□□□□ 0.25
LINC01238-205ENST00000567549 OPN1LWP04000 364 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms