RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 UBQLN4Q9NRR5 601 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 CDC42EP3Q9UKI2 254 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 STK38LQ9Y2H1 464 aa13.7□□□□□ -0.22
PALB2-205ENST00000567003 CCDC151A5D8V7 595 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 E7EQL1 145 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 ZNF195O14628 629 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 NUDT14O95848 222 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 ELK4P28324 431 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 OR3A2P47893 321 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 CASP9P55211 416 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 C11orf71Q6IPW1 123 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 IKBIPQ70UQ0 350 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 LSRQ86X29 649 aaPredicted RBP13.69□□□□□ -0.22
PALB2-205ENST00000567003 ZNF525Q8N782 197 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 PHOSPHO1Q8TCT1 267 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 ZFP90Q8TF47 636 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 IFT81Q8WYA0 676 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 JADE3Q92613 823 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 CHMP6Q96FZ7 201 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 ZNF300Q96RE9 604 aaPredicted RBP13.69□□□□□ -0.22
PALB2-205ENST00000567003 TNFRSF13CQ96RJ3 184 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 BEX2Q9BXY8 128 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 TIGARQ9NQ88 270 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 CARD8Q9Y2G2 431 aa13.69□□□□□ -0.22
PALB2-205ENST00000567003 EXOC1LA0A1B0GW35 172 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 RSL1D1O76021 490 aaKnown RBP13.68□□□□□ -0.22
PALB2-205ENST00000567003 FESP07332 822 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 IFI6P09912 130 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 ALOX5P09917 674 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 IGHV1-2P23083 117 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 ECHS1P30084 290 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 EIF1P41567 113 aaKnown RBP13.68□□□□□ -0.22
PALB2-205ENST00000567003 AGAP6Q5VW22 663 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 CLEC2AQ6UVW9 174 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 B3GLCTQ6Y288 498 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 Q6ZT83 130 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 SLC22A9Q8IVM8 553 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 MISPQ8IVT2 679 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 CEP70Q8NHQ1 597 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 FAM76AQ8TAV0 307 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 CDS1Q92903 461 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 ADAD1Q96M93 576 aaKnown RBP13.68□□□□□ -0.22
PALB2-205ENST00000567003 TSSK3Q96PN8 268 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 PSD2Q9BQI7 771 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 C19orf24Q9BVV8 132 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 FAIMQ9NVQ4 179 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 SH3BP4Q9P0V3 963 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 CCL27Q9Y4X3 112 aa13.68□□□□□ -0.22
PALB2-205ENST00000567003 A0A087WUV0 522 aaPredicted RBP13.67□□□□□ -0.22
PALB2-205ENST00000567003 A0A1W2PQD3 144 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 A0A1W2PR80 420 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 SMAD9O15198 467 aaKnown RBP13.67□□□□□ -0.22
PALB2-205ENST00000567003 SEC22BO75396 215 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 CRCPO75575 148 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 IGHV3-9P01782 118 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 POU6F2P78424 691 aaPredicted RBP13.67□□□□□ -0.22
PALB2-205ENST00000567003 VLDLRP98155 873 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 KIAA0040Q15053 153 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 NRF1Q16656 503 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 EXOSC6Q5RKV6 272 aaKnown RBP13.67□□□□□ -0.22
PALB2-205ENST00000567003 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
PALB2-205ENST00000567003 CLEC6AQ6EIG7 209 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 LRIG3Q6UXM1 1119 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 TIFABQ6ZNK6 161 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 ZFP28Q8NHY6 868 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 PPCDCQ96CD2 204 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 FMO2Q99518 471 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 GRIP2Q9C0E4 1043 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 ANKZF1Q9H8Y5 726 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 BCO1Q9HAY6 547 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 NTMQ9P121 344 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 BAIAP2L1Q9UHR4 511 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 EMCNQ9ULC0 261 aa13.67□□□□□ -0.22
PALB2-205ENST00000567003 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
PALB2-205ENST00000567003 GJE1A6NN92 205 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 G3V2L1 256 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 LY6HO94772 140 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 H6PDO95479 791 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 PRKCAP17252 672 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 SDC1P18827 310 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 TTKP33981 857 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 ZNF83P51522 516 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
PALB2-205ENST00000567003 RASGEF1BQ0VAM2 473 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 LASP1Q14847 261 aaKnown RBP13.66□□□□□ -0.22
PALB2-205ENST00000567003 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 Q6ZSR9 355 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 FRMD7Q6ZUT3 714 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 OR2T11Q8NH01 316 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 OR52N5Q8NH56 324 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 GPR119Q8TDV5 335 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 ZNF75CPQ92670 426 aaPredicted RBP13.66□□□□□ -0.22
PALB2-205ENST00000567003 MUCL1Q96DR8 90 aa13.66□□□□□ -0.22
PALB2-205ENST00000567003 FAM120BQ96EK7 910 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms