RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RND1Q92730 232 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 HOXB13Q92826 284 aaPredicted RBP12.23□□□□□ -0.45
CLK3-218ENST00000566926 STACQ99469 402 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 PIF1Q9H611 641 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 MAGIXQ9H6Y5 334 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 GALNT9Q9HCQ5 603 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 PNPLA3Q9NST1 481 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 EXD2Q9NVH0 621 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 C6orf203Q9P0P8 240 aaPredicted RBP12.23□□□□□ -0.45
CLK3-218ENST00000566926 MED12Q93074 2177 aa12.23□□□□□ -0.45
CLK3-218ENST00000566926 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 HMGN4O00479 90 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 ADAM10O14672 748 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CLDN14O95500 239 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CYP4B1P13584 511 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 LCN1P31025 176 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 EVI2BP34910 448 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 MAP3K8P41279 467 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 SCARB2Q14108 478 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 LASP1Q14847 261 aaKnown RBP12.22□□□□□ -0.45
CLK3-218ENST00000566926 FAM98BQ52LJ0 330 aaKnown RBP12.22□□□□□ -0.45
CLK3-218ENST00000566926 EMC4Q5J8M3 183 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 COX20Q5RI15 118 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 FBXW10Q5XX13 1052 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 REEP3Q6NUK4 255 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 MFSD12Q6NUT3 480 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CDC73Q6P1J9 531 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CYP2R1Q6VVX0 501 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 B3GNT6Q6ZMB0 384 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CCDC80Q76M96 950 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CLEC4FQ8N1N0 589 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 OR5M9Q8NGP3 310 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 ASB5Q8WWX0 329 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 LZICQ8WZA0 190 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 PMM1Q92871 262 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 GIMAP5Q96F15 307 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 SPATA5L1Q9BVQ7 753 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 SLC6A15Q9H2J7 730 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CHST11Q9NPF2 352 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 DUSP22Q9NRW4 184 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 CCM2LQ9NUG4 571 aaPredicted RBP12.22□□□□□ -0.45
CLK3-218ENST00000566926 DCAF13Q9NV06 445 aaKnown RBP12.22□□□□□ -0.45
CLK3-218ENST00000566926 ARMC1Q9NVT9 282 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 ADPRHL2Q9NX46 363 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 STOML1Q9UBI4 398 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 MRPS18CQ9Y3D5 142 aaKnown RBP12.22□□□□□ -0.45
CLK3-218ENST00000566926 AP4S1Q9Y587 144 aa12.22□□□□□ -0.45
CLK3-218ENST00000566926 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
CLK3-218ENST00000566926 PKDREJQ9NTG1 2253 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 AHRRA9YTQ3 701 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 PRSS44E7EML9 344 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 KRT36O76013 467 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 ACTL6AO96019 429 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 GUSBP08236 651 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 TFPTP0C1Z6 253 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 SRD5A2P31213 254 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 KDELR2P33947 212 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 RFX3P48380 749 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 CRISP3P54108 245 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 NHSL2Q5HYW2 709 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 TNFAIP8L2Q6P589 184 aaPredicted RBP12.21□□□□□ -0.45
CLK3-218ENST00000566926 FKBP9P1Q75LS8 142 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
CLK3-218ENST00000566926 KRT73Q86Y46 540 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 C10orf111Q8N326 155 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 COX18Q8N8Q8 333 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 WDSUB1Q8N9V3 476 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 FAM83FQ8NEG4 500 aaPredicted RBP12.21□□□□□ -0.45
CLK3-218ENST00000566926 OR4K17Q8NGC6 315 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 OR14L1PQ8NHC6 308 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 ADAMTS15Q8TE58 950 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 CA5BP1Q8WTZ4 195 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 RMND5BQ96G75 393 aaPredicted RBP12.21□□□□□ -0.45
CLK3-218ENST00000566926 TRNT1Q96Q11 434 aaKnown RBP12.21□□□□□ -0.45
CLK3-218ENST00000566926 ZNF607Q96SK3 696 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 G6PC3Q9BUM1 346 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 BTBD2Q9BX70 525 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 TBL1XR1Q9BZK7 514 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 OR51I1Q9H343 314 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 RUBCNLQ9H714 662 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 ALKBH4Q9NXW9 302 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 PPP4R1LQ9P1A2 415 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 SPRR3Q9UBC9 169 aa12.21□□□□□ -0.45
CLK3-218ENST00000566926 DOCK7Q96N67 2140 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 HCFC1P51610 2035 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 TCRBV5S2A0A599 114 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 GXYLT2A0PJZ3 443 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 FADS1O60427 444 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 SERPINB7O75635 380 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 RAP2AP10114 183 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 ACP2P11117 423 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 ETS2P15036 469 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 NCK1P16333 377 aa12.2□□□□□ -0.46
CLK3-218ENST00000566926 ENDOUP21128 410 aaKnown RBP12.2□□□□□ -0.46
CLK3-218ENST00000566926 PCBP3P57721 371 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms