RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 FANK1Q8TC84 345 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 LMF1Q96S06 567 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 DCLRE1CQ96SD1 692 aaKnown RBP11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 FOLH1BQ9HBA9 442 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 MEPEQ9NQ76 525 aaPredicted RBP11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 UCKL1Q9NWZ5 548 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 TXNL4BQ9NX01 149 aaKnown RBP11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 FLRT3Q9NZU0 649 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 CBLCQ9ULV8 474 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 SATB2Q9UPW6 733 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 CDH10Q9Y6N8 788 aa11.31□□□□□ -0.6
SCAMP2-207ENST00000566480 UNC119BA6NIH7 251 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 LYPD3O95274 346 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CSF2P04141 144 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CAPZBP47756 277 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SLC16A1P53985 500 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 PRTGQ2VWP7 1150 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 KLHL12Q53G59 568 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SIRT6Q8N6T7 355 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 POC5Q8NA72 575 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 RCBTB1Q8NDN9 531 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 NR4A3Q92570 626 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 BPIFA2Q96DR5 249 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SECISBP2Q96T21 854 aaKnown RBP11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SEC14L4Q9UDX3 406 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 ZNF223Q9UK11 482 aaPredicted RBP11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 ERVK-19Q9WJR5 959 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 HYKKA2RU49 373 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 LRRN3E7EW58 273 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 NKX2-2O95096 273 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 IFNA16P05015 189 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CLUP10909 449 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SLC1A3P43003 542 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 RPL6Q02878 288 aaKnown RBP11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 ELOCQ15369 112 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 ZMAT1Q5H9K5 638 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 C3orf38Q5JPI3 329 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 SNAP47Q5SQN1 464 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 NPSR1Q6W5P4 371 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 LAX1Q8IWV1 398 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CYB561A3Q8NBI2 242 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 TMEM131Q92545 1883 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CEP19Q96LK0 163 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 CD180Q99467 661 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 NEURL2Q9BR09 285 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 TMED9Q9BVK6 235 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 LRRN3Q9H3W5 708 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 PRTFDC1Q9NRG1 225 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 FBXL4Q9UKA2 621 aa11.3□□□□□ -0.6
SCAMP2-207ENST00000566480 ZNF670-ZNF695F2Z2N8 137 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 HRO43593 1189 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 GYPBP06028 91 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 NGFRP08138 427 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 RNH1P13489 461 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CPEP16870 476 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 AZGP1P25311 298 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 FZD5Q13467 585 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CRTC2Q53ET0 693 aaPredicted RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CXXC5Q7LFL8 322 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 GATSQ8NAP1 163 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 NLGN4YQ8NFZ3 816 aaPredicted RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 TBC1D17Q9HA65 648 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 H2AFY2Q9P0M6 372 aaPredicted RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 A0A1B0GWA3 101 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 FAM86C2PA6NEL3 165 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 SNTNA6NMZ2 147 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 A8MUA0 341 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 DVL2O14641 736 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 REM1O75628 298 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 MRPL3P09001 348 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 MSL3P1P0C860 447 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 NME1P15531 152 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 SPNP16150 400 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 BMP7P18075 431 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CELP19835 753 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 ENDOUP21128 410 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 TBXA2RP21731 343 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 ALAS2P22557 587 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 TNFSF8P32971 234 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 SDC2P34741 201 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 SLC9A3P48764 834 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 BNC1Q01954 994 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 SPANXN2Q5MJ10 180 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 TMEM164Q5U3C3 297 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 TMEM53Q6P2H8 277 aa11.29□□□□□ -0.6
SCAMP2-207ENST00000566480 CADM3Q8N126 398 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms