RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MAL2Q969L2 176 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 REXO5Q96IC2 774 aaKnown RBP11.55□□□□□ -0.56
SF3B3-206ENST00000565990 TREX2Q9BQ50 279 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-206ENST00000565990 BCL7BQ9BQE9 202 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.55□□□□□ -0.56
SF3B3-206ENST00000565990 RUBCNLQ9H714 662 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 DEPPQ9NTK1 212 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 CALML5Q9NZT1 146 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 FLRT3Q9NZU0 649 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 MKLN1Q9UL63 735 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 ABCG2Q9UNQ0 655 aa11.55□□□□□ -0.56
SF3B3-206ENST00000565990 A0A1W2PQD3 144 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 AGAP5A6NIR3 686 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ALG1L2C9J202 215 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 KLRC4-KLRK1H3BQV0 150 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 KIAA0513O60268 411 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ICOSLGO75144 302 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 TRIM3O75382 744 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-206ENST00000565990 UGT2B17O75795 530 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 P04436 131 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 NR2F1P10589 423 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ETS2P15036 469 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 RPS4Y1P22090 263 aaKnown RBP11.54□□□□□ -0.56
SF3B3-206ENST00000565990 DCKP27707 260 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ALDH3A2P51648 485 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 CRISP3P54108 245 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 HPCAP84074 193 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 IL18R1Q13478 541 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 DAG1Q14118 895 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF169Q14929 603 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-206ENST00000565990 HYAL4Q2M3T9 481 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 VMACQ2NL98 169 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 GPAT3Q53EU6 434 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 GLYATQ6IB77 296 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ERICH5Q6P6B1 374 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 CCDC80Q76M96 950 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 SLC30A8Q8IWU4 369 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 SULF2Q8IWU5 870 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 ZNF619Q8N2I2 560 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 DRAXINQ8NBI3 349 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-206ENST00000565990 POGLUT1Q8NBL1 392 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 C11orf65Q8NCR3 313 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 OR5M3Q8NGP4 307 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 PNPLA2Q96AD5 504 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 SDCCAG3Q96C92 435 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 NRBF2Q96F24 287 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 TMEM19Q96HH6 336 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 RTN4RQ9BZR6 473 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 PALMDQ9NP74 551 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 SACM1LQ9NTJ5 587 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 DNAJB9Q9UBS3 223 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 BLOC1S6Q9UL45 172 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 OAZ3Q9UMX2 235 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 LHX6Q9UPM6 363 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 KLF13Q9Y2Y9 288 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-206ENST00000565990 WDR45Q9Y484 360 aa11.54□□□□□ -0.56
SF3B3-206ENST00000565990 BSNQ9UPA5 3926 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 IGLV3-32A0A0A0MS00 114 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 SAC3D1A6NKF1 404 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 FAM220BPB1ANY3 271 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 H3BSA7 217 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 SLC28A2O43868 658 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 HS6ST1O60243 411 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 NOL3O60936 208 aaKnown RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 OXSR1O95747 527 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 ENDOUP21128 410 aaKnown RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 EVI2BP34910 448 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 RFX3P48380 749 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 CLK3P49761 638 aaKnown RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 PCBP3P57721 371 aaKnown RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 SCARB2Q14108 478 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 LY6DQ14210 128 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 GK3PQ14409 553 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 GPR68Q15743 365 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 MAPK14Q16539 360 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 FLYWCH1Q4VC44 716 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 CYBRD1Q53TN4 286 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 FNDC7Q5VTL7 733 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 SLC6A19Q695T7 634 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 OLIG3Q7RTU3 272 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 GALNT10Q86SR1 603 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 Q8NA96 180 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 ZFP62Q8NB50 900 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 TMEM178AQ8NBL3 297 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 BBS10Q8TAM1 723 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 FAM81AQ8TBF8 368 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 TMEM41AQ96HV5 264 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 C5orf34Q96MH7 638 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 FAM173AQ9BQD7 235 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 RSPO3Q9BXY4 272 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 HES7Q9BYE0 225 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 PLGRKTQ9HBL7 147 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 TBCCD1Q9NVR7 557 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 EGFL7Q9UHF1 273 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 PCDHGB5Q9Y5G0 923 aa11.53□□□□□ -0.56
SF3B3-206ENST00000565990 GPC6Q9Y625 555 aaPredicted RBP11.53□□□□□ -0.56
SF3B3-206ENST00000565990 HEATR5AQ86XA9 2040 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms