RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ABCA2Q9BZC7 2435 aa16.57■□□□□ 0.24
CLN6-204ENST00000564752 NPIPA5A0A0B4J1W7 369 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 NPIPA7E9PJI5 369 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 SDHDO14521 159 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 SMPD2O60906 423 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 SNNO75324 88 aaPredicted RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 NPIPA8P0DM63 369 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 IL11P20809 199 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 FPR1P21462 350 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 LOXP28300 417 aaPredicted RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 ADSLP30566 484 aaPredicted RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 EIF1AXP47813 144 aaKnown RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 RPS26P62854 115 aaKnown RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 LTBQ06643 244 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 CD226Q15762 336 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 ANXA8L1Q5VT79 327 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 ANKRD34AQ69YU3 496 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 ANKRD46Q86W74 232 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 P3H2Q8IVL5 708 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 WDR75Q8IWA0 830 aaKnown RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 VPS37AQ8NEZ2 397 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 PHOSPHO1Q8TCT1 267 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 ACTRT2Q8TDY3 377 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 ZBTB8AQ96BR9 441 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 NPAS1Q99742 590 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 PRRG4Q9BZD6 226 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 KLHL4Q9C0H6 718 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 PAQR5Q9NXK6 330 aaPredicted RBP16.56■□□□□ 0.24
CLN6-204ENST00000564752 EMC9Q9Y3B6 208 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 KCNE3Q9Y6H6 103 aa16.56■□□□□ 0.24
CLN6-204ENST00000564752 C7orf72A4D263 438 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 TRPC5OSA6NMA1 111 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 E9PBE3 544 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 H3BNH8 94 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 ANKRD28O15084 1053 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 ADAMDEC1O15204 470 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 HDAC3O15379 428 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 KITP10721 976 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 MATN1P21941 496 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 PSMA4P25789 261 aaKnown RBP16.55■□□□□ 0.24
CLN6-204ENST00000564752 RAC1P63000 192 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 CASP8Q14790 479 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 CTU2Q2VPK5 515 aaKnown RBP16.55■□□□□ 0.24
CLN6-204ENST00000564752 PLPPR5Q32ZL2 321 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 SPANXN4Q5MJ08 99 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 Q5PR19 223 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 C6orf120Q7Z4R8 191 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 MTERF4Q7Z6M4 381 aaKnown RBP16.55■□□□□ 0.24
CLN6-204ENST00000564752 CLEC4FQ8N1N0 589 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 ZNF614Q8N883 585 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 OR6K3Q8NGY3 331 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 OR10D3Q8NH80 312 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 B4GALNT2Q8NHY0 566 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 GMPPAQ96IJ6 420 aaPredicted RBP16.55■□□□□ 0.24
CLN6-204ENST00000564752 HS3ST6Q96QI5 342 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 MANSC1Q9H8J5 431 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 UBTD1Q9HAC8 227 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 MED17Q9NVC6 651 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 AIG1Q9NVV5 245 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 ARID1AO14497 2285 aa16.55■□□□□ 0.24
CLN6-204ENST00000564752 GOLGA8QA0A0J9YX86 632 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 PRSS51A0A1B0GVH4 220 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 GOLGA8OA6NCC3 632 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 DUXAA6NLW8 204 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 GOLGA8NF8WBI6 632 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 SLCO1B7G3V0H7 640 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 SS18L1O75177 396 aaPredicted RBP16.54■□□□□ 0.24
CLN6-204ENST00000564752 CPSF4O95639 269 aaKnown RBP16.54■□□□□ 0.24
CLN6-204ENST00000564752 AK1P00568 194 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 OPN1LWP04000 364 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 ALDOCP09972 364 aaKnown RBP16.54■□□□□ 0.24
CLN6-204ENST00000564752 EPHA3P29320 983 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 S100A3P33764 101 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 NME5P56597 212 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 ZNF117Q03924 483 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 EXOC3L2Q2M3D2 409 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 FAM174BQ3ZCQ3 159 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 PPP4R4Q6NUP7 873 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 PRSS57Q6UWY2 283 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 CLEC9AQ6UXN8 241 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 Q71RC1 249 aaPredicted RBP16.54■□□□□ 0.24
CLN6-204ENST00000564752 SPATA19Q7Z5L4 167 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 RNF145Q96MT1 663 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 CCL19Q99731 98 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 SERHL2Q9H4I8 314 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 WDR55Q9H6Y2 383 aaPredicted RBP16.54■□□□□ 0.24
CLN6-204ENST00000564752 MCTS1Q9ULC4 181 aaKnown RBP16.54■□□□□ 0.24
CLN6-204ENST00000564752 CLEC4AQ9UMR7 237 aa16.54■□□□□ 0.24
CLN6-204ENST00000564752 NSD1Q96L73 2696 aaPredicted RBP16.53■□□□□ 0.24
CLN6-204ENST00000564752 CXCL13O43927 109 aa16.53■□□□□ 0.24
CLN6-204ENST00000564752 SCN2BO60939 215 aa16.53■□□□□ 0.24
CLN6-204ENST00000564752 NUDT14O95848 222 aa16.53■□□□□ 0.24
CLN6-204ENST00000564752 PLGP00747 810 aaPredicted RBP16.53■□□□□ 0.24
CLN6-204ENST00000564752 THBDP07204 575 aa16.53■□□□□ 0.24
CLN6-204ENST00000564752 PPP3CBP16298 524 aa16.53■□□□□ 0.24
CLN6-204ENST00000564752 UQCRC2P22695 453 aa16.53■□□□□ 0.24
CLN6-204ENST00000564752 RNF144AP50876 292 aaPredicted RBP16.53■□□□□ 0.24
CLN6-204ENST00000564752 ATP12AP54707 1039 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms