RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 KIR3DL3Q8N743 410 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 AKR7LQ8NHP1 331 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 RAB3IL1Q8TBN0 382 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TFB1MQ8WVM0 346 aaKnown RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 OR5B2Q96R09 309 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SLC17A5Q9NRA2 495 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TXLNGQ9NUQ3 528 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 IMPAD1Q9NX62 359 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 NAP1L2Q9ULW6 460 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 MAD1L1Q9Y6D9 718 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TDRD15B5MCY1 1934 aaKnown RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 FOXE1O00358 373 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 TIMM8AO60220 97 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 ERLIN1O75477 346 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 VENTXO95231 258 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 GJB5O95377 273 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SLC2A10O95528 541 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ALPIP09923 528 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TOP1P11387 765 aaKnown RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 NCK1P16333 377 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 MX1P20591 662 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CYP2B6P20813 491 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 OC90Q02509 493 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 GBE1Q04446 702 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ST3GAL3Q11203 375 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ABRAXAS2Q15018 415 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 DPYSL2Q16555 572 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TP53I3Q53FA7 332 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 KLHL22Q53GT1 634 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 NHLRC3Q5JS37 347 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 KCNIP4Q6PIL6 250 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ZNF600Q6ZNG1 722 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SERINC5Q86VE9 423 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SLC22A18ASQ8N1D0 253 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 CLEC4FQ8N1N0 589 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 NECAB1Q8N987 351 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 Q8N9G6 341 aaPredicted RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 OR4D9Q8NGE8 314 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 OR51G2Q8NGK0 314 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 TRUB1Q8WWH5 349 aaKnown RBP2.03□□□□□ -2.08
CHD9-209ENST00000564255 ARNTL2Q8WYA1 636 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SPATA16Q9BXB7 569 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 GPR61Q9BZJ8 451 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 VCPKMTQ9H867 229 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 PANK3Q9H999 370 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 GNB4Q9HAV0 340 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 B3GNT2Q9NY97 397 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SENP1Q9P0U3 644 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 SUN2Q9UH99 717 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 ERVW-1Q9UQF0 538 aa2.03□□□□□ -2.08
CHD9-209ENST00000564255 RPAP1Q9BWH6 1393 aaPredicted RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 A0A1W2PPE3 182 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 ARHGEF35A5YM69 484 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 F5H6K3 240 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 K7ENP7 123 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 HOXD4P09016 255 aaPredicted RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 RNF224P0DH78 156 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 HOXB6P17509 224 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 NCF2P19878 526 aaPredicted RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 LIM2P55344 173 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 KLRC3Q07444 240 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 FGL1Q08830 312 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 C1orf220Q5T0J3 134 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 METTL7BQ6UX53 244 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 VITQ6UXI7 678 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 TIPARPQ7Z3E1 657 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 NANOGNBQ7Z5D8 188 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 TPRA1Q86W33 373 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 KRTAP7-1Q8IUC3 87 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 UBE2J2Q8N2K1 259 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 CATSPER1Q8NEC5 780 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 OR2T33Q8NG76 320 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SLC2A14Q8TDB8 520 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 RASD2Q96D21 266 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 CELF6Q96J87 481 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 C18orf12Q96KH6 178 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SLC35A5Q9BS91 424 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 CHRDL1Q9BU40 450 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 NXF5Q9H1B4 397 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 ADNPQ9H2P0 1102 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 ETNK2Q9NVF9 386 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 DHRS4-AS1Q9P1J3 65 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 ANGPTL2Q9UKU9 493 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 AK6Q9Y3D8 172 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 CC2D2AQ9P2K1 1620 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 KRTAP16-1A8MUX0 517 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 B4DXG7 233 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 H3BMQ9 156 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 SAP18O00422 153 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 RS1O15537 224 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 MED7O43513 233 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 LATO43561 262 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 N4BP1O75113 896 aaKnown RBP2.02□□□□□ -2.09
CHD9-209ENST00000564255 ZNF253O75346 499 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 UGT2B17O75795 530 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 LAMP1P11279 417 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 ACADSP16219 412 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 CCNCP24863 283 aa2.02□□□□□ -2.09
CHD9-209ENST00000564255 EFNA3P52797 238 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms