RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 EIF4E2O60573 245 aaKnown RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 LYPD3O95274 346 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 NTN1O95631 604 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 RYKP34925 604 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 CASP3P42574 277 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 CLK3P49761 638 aaKnown RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 DAPP51397 102 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ALDH3A2P51648 485 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SMIM11AP58511 58 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 PPP2R2BQ00005 443 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ST3GAL3Q11203 375 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 DAG1Q14118 895 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 DGCR6Q14129 220 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 GK3PQ14409 553 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 MICAQ29983 383 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 FGD3Q5JSP0 725 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 DCST1Q5T197 706 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 PODNL1Q6PEZ8 512 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 NKAIN4Q8IVV8 208 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ZNF440Q8IYI8 595 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 DND1Q8IYX4 353 aaKnown RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 BEST3Q8N1M1 668 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 TMEM156Q8N614 296 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 TMCO5AQ8N6Q1 288 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 LSMEM1Q8N8F7 131 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 CLEC1AQ8NC01 280 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ZNF248Q8NDW4 579 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SLC7A13Q8TCU3 470 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 GIPC3Q8TF64 312 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 DUSP19Q8WTR2 217 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ZNF524Q96C55 264 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SDCCAG3Q96C92 435 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SH3YL1Q96HL8 342 aaPredicted RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 PRSS27Q9BQR3 290 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 GALNT9Q9HCQ5 603 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SH2D2AQ9NP31 389 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
SMG1-208ENST00000563448 USE1Q9NZ43 259 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 ICAM5Q9UMF0 924 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 SPTBN2O15020 2390 aa9.29□□□□□ -0.92
SMG1-208ENST00000563448 A0A0B4J2E0 115 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 A0A1B0GX12 115 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 TRAPPC13A5PLN9 417 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ZNF891A8MT65 544 aaPredicted RBP9.28□□□□□ -0.92
SMG1-208ENST00000563448 H0YJX3 145 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 HCRTR2O43614 444 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 CCNB2O95067 398 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ALPLP05186 524 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ENDOUP21128 410 aaKnown RBP9.28□□□□□ -0.92
SMG1-208ENST00000563448 CDC20Q12834 499 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 TRAM2Q15035 370 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 TMEM81Q6P7N7 255 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ZNF613Q6PF04 617 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 MISPQ8IVT2 679 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 GALNT16Q8N428 558 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 OR10G2Q8NGC3 310 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 OR9Q2Q8NGE9 314 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ZNF597Q96LX8 424 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ZNF184Q99676 751 aaPredicted RBP9.28□□□□□ -0.92
SMG1-208ENST00000563448 PSD2Q9BQI7 771 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 TRIM2Q9C040 744 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 VCXQ9H320 206 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 METTL7AQ9H8H3 244 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 TMEM27Q9HBJ8 222 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 C8orf4Q9NR00 106 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 HPF1Q9NWY4 346 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 ANKRD10Q9NXR5 420 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 KLRF1Q9NZS2 232 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 SLC7A7Q9UM01 511 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 HRH3Q9Y5N1 445 aa9.28□□□□□ -0.92
SMG1-208ENST00000563448 A0A1B0GWA3 101 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 SH3PXD2BA1X283 911 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 FAAHO00519 579 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 KLK10O43240 276 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 GMFGO60234 142 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 HPRP00739 348 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 LINGO3P0C6S8 592 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 CCL3P10147 92 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 THRBP10828 461 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 IFNA8P32881 189 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 ID4P47928 161 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 IDH2P48735 452 aaKnown RBP9.27□□□□□ -0.92
SMG1-208ENST00000563448 P2RX1P51575 399 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 CCR4P51679 360 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 RRADP55042 308 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 SOX8P57073 446 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.92
SMG1-208ENST00000563448 C17orf67Q0P5P2 114 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 ZNF770Q6IQ21 691 aaPredicted RBP9.27□□□□□ -0.92
SMG1-208ENST00000563448 FAHD1Q6P587 224 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 WDR88Q6ZMY6 472 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 ZNF227Q86WZ6 799 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 CADM2Q8N3J6 435 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 B4GALNT2Q8NHY0 566 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 SNIP1Q8TAD8 396 aaKnown RBP9.27□□□□□ -0.92
SMG1-208ENST00000563448 PAQR8Q8TEZ7 354 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 DNAJC9Q8WXX5 260 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 NTNG2Q96CW9 530 aa9.27□□□□□ -0.92
SMG1-208ENST00000563448 SECISBP2Q96T21 854 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms