RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 NTSR2O95665 410 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 AK1P00568 194 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ALKBH1Q13686 389 aaKnown RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 GGNBP1Q5YKI7 109 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 TFAP2EQ6VUC0 442 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 GLDNQ6ZMI3 551 aaPredicted RBP5.9□□□□□ -1.46
CLK3-212ENST00000563418 OOSP2Q86WS3 158 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 BAP18Q8IXM2 172 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ZNF354BQ96LW1 612 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 FBXW11Q9UKB1 542 aa5.9□□□□□ -1.46
CLK3-212ENST00000563418 ATXN1LP0C7T5 689 aaKnown RBP5.9□□□□□ -1.47
CLK3-212ENST00000563418 HAGHQ16775 308 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 ARHGAP11BQ3KRB8 267 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 OPN5Q6U736 354 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 C16orf59Q7L2K0 433 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 PLPP6Q8IY26 295 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 HSD17B11Q8NBQ5 300 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 SFXN5Q8TD22 340 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 LRRN4Q8WUT4 740 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 FAM151AQ8WW52 585 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 SMIM12Q96EX1 92 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 ELL3Q9HB65 397 aaPredicted RBP5.9□□□□□ -1.47
CLK3-212ENST00000563418 PCTPQ9UKL6 214 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 TRPM3Q9HCF6 1732 aaPredicted RBP5.9□□□□□ -1.47
CLK3-212ENST00000563418 NFKBIEO00221 500 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 ZNF20P17024 532 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 CD96P40200 585 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 RFX2P48378 723 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 ST8SIA6P61647 398 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 PPA1Q15181 289 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 P2RY14Q15391 338 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 DOK7Q18PE1 504 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 METTL7BQ6UX53 244 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 EIF4E3Q8N5X7 224 aaKnown RBP5.9□□□□□ -1.47
CLK3-212ENST00000563418 NKD1Q969G9 470 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 ZNF385DQ9H6B1 395 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 FN3KRPQ9HA64 309 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 PDE7BQ9NP56 450 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 MED31Q9Y3C7 131 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 SPATA31A3Q5VYP0 1347 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 ZCWPW2A0A1B0GU75 182 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 DPM1O60762 260 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 STBD1O95210 358 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 RPS25P62851 125 aaKnown RBP5.9□□□□□ -1.47
CLK3-212ENST00000563418 SERINC3Q13530 473 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 DGKZQ13574 1117 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 RBM39Q14498 530 aaKnown RBP5.9□□□□□ -1.47
CLK3-212ENST00000563418 LIPJQ5W064 366 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 FIGNL1Q6PIW4 674 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 DCXRQ7Z4W1 244 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 OR4F15Q8NGB8 312 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 CLMPQ9H6B4 373 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 TOGARAM1Q9Y4F4 1720 aa5.9□□□□□ -1.47
CLK3-212ENST00000563418 TPST2O60704 377 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TAZQ16635 292 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 NOXRED1Q6NXP6 359 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TNFAIP8L2Q6P589 184 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 BCO2Q9BYV7 579 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 MVB12BQ9H7P6 319 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RXFP3Q9NSD7 469 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 PCDHB10Q9UN67 800 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RAI2Q9Y5P3 530 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 PAGE1O75459 146 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 VNN1O95497 513 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 NFATC1O95644 943 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 PBX2P40425 430 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR1G1P47890 313 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 LSSP48449 732 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 HTD2P86397 168 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CHADLQ6NUI6 762 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 B3GLCTQ6Y288 498 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 MBOAT1Q6ZNC8 495 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 C17orf64Q86WR6 236 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 SLC24A4Q8NFF2 622 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 MIXL1Q9H2W2 232 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RHOFQ9HBH0 211 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GDF2Q9UK05 429 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 KCNK7Q9Y2U2 307 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OARD1Q9Y530 152 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RREB1Q92766 1687 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GPX5O75715 221 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CXCR1P25024 350 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 NDUFV1P49821 464 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ZNF345Q14585 488 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 DPPA4Q7L190 304 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 KRTCAP2Q8N6L1 136 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR13C3Q8NGS6 347 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ZBTB45Q96K62 511 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 C3orf30Q96M34 536 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 APOBEC3GQ9HC16 384 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PARD6AQ9NPB6 346 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 MRPL15Q9P015 296 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PFKMP08237 780 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 HAPLN1P10915 354 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 GNSP15586 552 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 BMI1P35226 326 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR1E2P47887 323 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 EPHB3P54753 998 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TPPP2P59282 170 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms