RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 UPK1AO00322 258 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF195O14628 629 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ST8SIA5O15466 376 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 COQ9O75208 318 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ALX3O95076 343 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 IGHV3-9P01782 118 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 NGFRP08138 427 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 DAOP14920 347 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ZFP36P26651 326 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 PRIM2P49643 509 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 KHKP50053 298 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 IDH3GP51553 393 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF41P51814 821 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ALDH18A1P54886 795 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 RAC3P60763 192 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 RAE1P78406 368 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 RASGEF1BQ0VAM2 473 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ILF2Q12905 390 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 CCNIQ14094 377 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 MLC1Q15049 377 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 EFNB3Q15768 340 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 PFKFB4Q16877 469 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 CMC1Q7Z7K0 106 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 FAM9CQ8IZT9 166 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 CENPLQ8N0S6 344 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 PDIK1LQ8N165 341 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 CDYL2Q8N8U2 506 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 GATSQ8NAP1 163 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 FBXO36Q8NEA4 188 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 TRIM58Q8NG06 486 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 ZFP90Q8TF47 636 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 EXOSC8Q96B26 276 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 OCSTAMPQ9BR26 566 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 FAIM2Q9BWQ8 316 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 RACGAP1Q9H0H5 632 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 UNKLQ9H9P5 680 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 NMRAL1Q9HBL8 299 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 Q9N2J8 555 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC35C2Q9NQQ7 365 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 G6PC2Q9NQR9 355 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 MED29Q9NX70 200 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 TAS2R16Q9NYV7 291 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 MALT1Q9UDY8 824 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 C19orf53Q9UNZ5 99 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC12A4Q9UP95 1085 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 MOKQ9UQ07 419 aa6.71□□□□□ -1.34
HERPUD1-206ENST00000563343 LOC105371242A0A075B767 164 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 IGKV3D-15A0A087WSY6 115 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 A0A1W2PNR3 127 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 CIB4A0PJX0 185 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 MYO1GB0I1T2 1018 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 B9A039 149 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 E7ESA3 106 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 KIF2AO00139 706 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 OIP5O43482 229 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 PDE5AO76074 875 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SNUPNO95149 360 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 MSMBP08118 114 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 IL3P08700 152 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SERPINF1P36955 418 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 EIF1P41567 113 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 RFX3P48380 749 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 FNTAP49354 379 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF75DP51815 510 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 PSMD4P55036 377 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC29A2Q14542 456 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 CD226Q15762 336 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ADIPOQQ15848 244 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 TMEM176BQ3YBM2 270 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 GGTA1PQ4G0N0 100 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 GLE1Q53GS7 698 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 FBLN7Q53RD9 439 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 TCHHL1Q5QJ38 904 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ABLIM2Q6H8Q1 611 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 METTL2BQ6P1Q9 378 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 VASH1Q7L8A9 365 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC46A3Q7Z3Q1 461 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 GALNT5Q7Z7M9 940 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 CARM1Q86X55 608 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF100Q8IYN0 542 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ZCCHC24Q8N2G6 241 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 OR2L13Q8N349 312 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 C1orf52Q8N6N3 182 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF527Q8NB42 609 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 CLDND2Q8NHS1 167 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 FBXO27Q8NI29 283 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 RHEBL1Q8TAI7 183 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 GRK7Q8WTQ7 553 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 NEU4Q8WWR8 484 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 PIK3R3Q92569 461 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SH3YL1Q96HL8 342 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 LRRC37BQ96QE4 947 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC6A7Q99884 636 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SUCNR1Q9BXA5 334 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SLITRK2Q9H156 845 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 CDC42EP4Q9H3Q1 356 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 NOL11Q9H8H0 719 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 PFDN4Q9NQP4 134 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC17A5Q9NRA2 495 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms