RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 ROPN1BQ9BZX4 212 aaPredicted RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 IQCGQ9H095 443 aaKnown RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 ROPN1Q9HAT0 212 aaPredicted RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 EML4Q9HC35 981 aaKnown RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 DUSP22Q9NRW4 184 aa9.03□□□□□ -0.96
SNX29-202ENST00000563308 ZCCHC3Q9NUD5 404 aaKnown RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 GPATCH2Q9NW75 528 aa9.03□□□□□ -0.96
SNX29-202ENST00000563308 GIN1Q9NXP7 522 aa9.03□□□□□ -0.96
SNX29-202ENST00000563308 C6orf203Q9P0P8 240 aaPredicted RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 ANK3Q12955 4377 aaKnown RBP9.03□□□□□ -0.96
SNX29-202ENST00000563308 A0A0J9YW62 118 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 A0A1W2PQD3 144 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 TMEM114B3SHH9 223 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 EIF1AYO14602 144 aaKnown RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 THBDP07204 575 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 LINGO3P0C6S8 592 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 CRYGSP22914 178 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 SHC1P29353 583 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 SERPINB5P36952 375 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 HPCAL1P37235 193 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 EIF1AXP47813 144 aaKnown RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 SERPINB4P48594 390 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 CCT3P49368 545 aaKnown RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 PRIM2P49643 509 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 CASP9P55211 416 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 C21orf58P58505 322 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 RPS3AP61247 264 aaKnown RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 RAC1P63000 192 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 POU6F2P78424 691 aaPredicted RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 CAPRIN1Q14444 709 aaKnown RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 KLHL26Q53HC5 615 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNX29-202ENST00000563308 IL23RQ5VWK5 629 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 CBLN3Q6UW01 205 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 ZNF550Q7Z398 422 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 SZRD1Q7Z422 152 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 WDR75Q8IWA0 830 aaKnown RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 OR10D3Q8NH80 312 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 OR5P2Q8WZ92 322 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 CAVIN3Q969G5 261 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 ZBTB8AQ96BR9 441 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 TRIM44Q96DX7 344 aaPredicted RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 SH3YL1Q96HL8 342 aaPredicted RBP9.02□□□□□ -0.97
SNX29-202ENST00000563308 RNF145Q96MT1 663 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 STACQ99469 402 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 PIGUQ9H490 435 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 ZNF696Q9H7X3 374 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 ELOVL5Q9NYP7 299 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 CLEC4AQ9UMR7 237 aa9.02□□□□□ -0.97
SNX29-202ENST00000563308 NPIPA5A0A0B4J1W7 369 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 NPIPA7E9PJI5 369 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 C16orf97H3BN30 126 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 ITM2AO43736 263 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 CXCL13O43927 109 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 SS18L1O75177 396 aaPredicted RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 SKAP2O75563 359 aaPredicted RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 LYPLA1O75608 230 aaPredicted RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 HSPA4LO95757 839 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 C6orf47O95873 294 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 NPIPA8P0DM63 369 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 G6PDP11413 515 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 FCGR2AP12318 317 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 POU2F1P14859 743 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 PAX1P15863 534 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 MAPK1P28482 360 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 RPL3P39023 403 aaKnown RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 ZNF117Q03924 483 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 FGFBP1Q14512 234 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 SGCBQ16585 318 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 ATP6AP1LQ52LC2 224 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 CDC73Q6P1J9 531 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 WDR93Q6P2C0 686 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 EMBQ6PCB8 327 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 MISPQ8IVT2 679 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 OR2V1Q8NHB1 315 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 B4GALNT2Q8NHY0 566 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 JADE3Q92613 823 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 GCDHQ92947 438 aaPredicted RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 PIK3IP1Q96FE7 263 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 GMPPAQ96IJ6 420 aaPredicted RBP9.01□□□□□ -0.97
SNX29-202ENST00000563308 PKNOX2Q96KN3 472 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 SLC39A3Q9BRY0 314 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 ACTRT3Q9BYD9 372 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 SERHL2Q9H4I8 314 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 TMEM185BQ9H7F4 350 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 HHATLQ9HCP6 504 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 ASIC5Q9NY37 505 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 ZNF226Q9NYT6 803 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 ICAM5Q9UMF0 924 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 PROCRQ9UNN8 238 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 SNX8Q9Y5X2 465 aa9.01□□□□□ -0.97
SNX29-202ENST00000563308 CR1P17927 2039 aa9□□□□□ -0.97
SNX29-202ENST00000563308 ESPNB1AK53 854 aa9□□□□□ -0.97
SNX29-202ENST00000563308 SCDO00767 359 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms