RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SLC41A3Q96GZ6 507 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 TIMD4Q96H15 378 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 C1orf147Q96MC9 270 aaPredicted RBP2.54□□□□□ -2
SHCBP1-202ENST00000563219 DUSP16Q9BY84 665 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ROPN1BQ9BZX4 212 aaPredicted RBP2.54□□□□□ -2
SHCBP1-202ENST00000563219 SIGLEC8Q9NYZ4 499 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 C6orf203Q9P0P8 240 aaPredicted RBP2.54□□□□□ -2
SHCBP1-202ENST00000563219 PIPOXQ9P0Z9 390 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SEC14L3Q9UDX4 400 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 PDE10AQ9Y233 779 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 OARD1Q9Y530 152 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 TIMM10BQ9Y5J6 103 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 GMPPBQ9Y5P6 360 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SLCO1B1Q9Y6L6 691 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 GON4LQ3T8J9 2241 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 IGHV3OR16-12A0A075B7B8 117 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 TRAV26-1A0A087WT03 109 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 XKRY2A2RUG3 117 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CCDC169A6NNP5 214 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 G3V3Y1 287 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 POLR2DO15514 142 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 MED7O43513 233 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 TIMM8AO60220 97 aaPredicted RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 GALR3O60755 368 aaPredicted RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 ZNF253O75346 499 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CIB2O75838 187 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 DIRAS1O95057 198 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 RENP00797 406 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 PIGRP01833 764 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 SLC35E2P0CK97 266 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 RPS2P15880 293 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 POLR2EP19388 210 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 PGCP20142 388 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 BCL3P20749 454 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CYP2B6P20813 491 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 MMP11P24347 488 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 P2RY1P47900 373 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 HLCSP50747 726 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 ATP1B3P54709 279 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 BST1Q10588 318 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 LAGE3Q14657 143 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 LTB4RQ15722 352 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 IMMTQ16891 758 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 TRIM16LQ309B1 348 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 TIGITQ495A1 244 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 HIGD2BQ4VC39 106 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 TEX44Q53QW1 395 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 HSP90AB3PQ58FF7 597 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 VWA2Q5GFL6 755 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 FAM120AOSQ5T036 256 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 LGSNQ5TDP6 509 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 WSCD1Q658N2 575 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 OR2A2Q6IF42 318 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 DHDDSQ86SQ9 333 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 MOB3BQ86TA1 216 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 IFNEQ86WN2 208 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 ERICH1Q86X53 443 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CDC20BQ86Y33 519 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 LRRC49Q8IUZ0 686 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 SLC35F2Q8IXU6 374 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 MTURNQ8N3F0 131 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 Q8N9G6 341 aaPredicted RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 OR1L4Q8NGR5 311 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 FLVCR1-AS1Q8TAF5 88 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 NOL4LQ96MY1 436 aaPredicted RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 RBM14Q96PK6 669 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 SLC38A2Q96QD8 506 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 OR5B2Q96R09 309 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CYP2S1Q96SQ9 504 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 HCAR1Q9BXC0 346 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 LRRN3Q9H3W5 708 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 GLIPR2Q9H4G4 154 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 VPS37BQ9H9H4 285 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 FN3KRPQ9HA64 309 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 PNO1Q9NRX1 252 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 ETNK2Q9NVF9 386 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 SMOXQ9NWM0 555 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 SUN2Q9UH99 717 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CIDEBQ9UHD4 219 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 CYTH4Q9UIA0 394 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 ZNF221Q9UK13 617 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 ADAM28Q9UKQ2 775 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 MRPL11Q9Y3B7 192 aaKnown RBP2.53□□□□□ -2
SHCBP1-202ENST00000563219 PPIAL4AQ9Y536 164 aa2.53□□□□□ -2
SHCBP1-202ENST00000563219 USP6P35125 1406 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 FRMPD4Q14CM0 1322 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 GOLGA8OA6NCC3 632 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF840PA6NDX5 716 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 FRG2CA6NGY1 282 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 E9PAM4 449 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 E9PLD3 99 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 GOLGA8NF8WBI6 632 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 MSH4O15457 936 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 BCL2L11O43521 198 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 KLHL41O60662 606 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 FCMRO60667 390 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 TRIM3O75382 744 aaPredicted RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 RHBDL1O75783 438 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ATP5LO75964 103 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms