RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	RAC3	P60763	192 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	TRADD	Q15628	312 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNHIT3	Q15649	155 aa	Predicted RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	CD226	Q15762	336 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ZSWIM7	Q19AV6	140 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SWI5	Q1ZZU3	235 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	CR1L	Q2VPA4	569 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	FAM174B	Q3ZCQ3	159 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SPIN4	Q56A73	249 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ARL13A	Q5H913	290 aa	Predicted RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	TCHHL1	Q5QJ38	904 aa	Predicted RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	MROH9	Q5TGP6	573 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	FAM71E1	Q6IPT2	247 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	TMEM107	Q6UX40	140 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	TMEM108	Q6UXF1	575 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	DEF8	Q6ZN54	512 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	RPS27L	Q71UM5	84 aa	Known RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	MISP	Q8IVT2	679 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	FBXL14	Q8N1E6	418 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SEMA6D	Q8NFY4	1073 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SLC9A6	Q92581	669 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	MUCL1	Q96DR8	90 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	APIP	Q96GX9	242 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	AMDHD1	Q96NU7	426 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ERP44	Q9BS26	406 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SOX7	Q9BT81	388 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	GLIPR2	Q9H4G4	154 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	CHODL	Q9H9P2	273 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	C3orf14	Q9HBI5	128 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	SENP1	Q9P0U3	644 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	DMGDH	Q9UI17	866 aa	Known RBP	7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	ACTL7B	Q9Y614	415 aa		7.31	□□□□□ -1.24
CKLF-208	ENST00000563092	IGKV3D-15	A0A087WSY6	115 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092		A0A0A6YYJ9	748 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	GNG14	A0A1W2PPG7	69 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	GJE1	A6NN92	205 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	SLCO1B7	G3V0H7	640 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	KIF2A	O00139	706 aa	Predicted RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	CYTIP	O60759	359 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	LY6H	O94772	140 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	JUN	P05412	331 aa	Known RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	APEH	P13798	732 aa	Known RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF23	P17027	643 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	SFTPD	P35247	375 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	HSD17B3	P37058	310 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	PRIM2	P49643	509 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	RNF144A	P50876	292 aa	Predicted RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	FABP6	P51161	128 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF41	P51814	821 aa	Predicted RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	NCBP2	P52298	156 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	CDH13	P55290	713 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	FOXF1	Q12946	379 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	STK11	Q15831	433 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	SLC25A53	Q5H9E4	307 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	XP32	Q5T750	250 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	BHLHB9	Q6PI77	547 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	C12orf54	Q6X4T0	127 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	ZAR1	Q86SH2	424 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	SGMS2	Q8NHU3	365 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	PIK3R3	Q92569	461 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF524	Q96C55	264 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	ZMYND19	Q96E35	227 aa	Predicted RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	GIMAP5	Q96F15	307 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	REXO5	Q96IC2	774 aa	Known RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	MUS81	Q96NY9	551 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	BBS4	Q96RK4	519 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	INPP5K	Q9BT40	448 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	UBQLN4	Q9NRR5	601 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	DDX18	Q9NVP1	670 aa	Known RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	KLHL9	Q9P2J3	617 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	ICAM5	Q9UMF0	924 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	NFU1	Q9UMS0	254 aa		7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	WBP11	Q9Y2W2	641 aa	Known RBP	7.3	□□□□□ -1.24
CKLF-208	ENST00000563092	LOC390937	A0A1W2PQ73	354 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	PDLIM1	O00151	329 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF195	O14628	629 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	DNAJA2	O60884	412 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	OR4F21	O95013	312 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	KCNK2	O95069	426 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	VENTX	O95231	258 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	TGFA	P01135	160 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	KRT6A	P02538	564 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	KRT6B	P04259	564 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	TACSTD2	P09758	323 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	BMP4	P12644	408 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	TSPAN8	P19075	237 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	APOBEC3A	P31941	199 aa	Predicted RBP	7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	MAGEA4	P43358	317 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	KRT6C	P48668	564 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	HTR6	P50406	440 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	SERPINB8	P50452	374 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	PDLIM4	P50479	330 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	SUMO3	P55854	103 aa	Predicted RBP	7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF117	Q03924	483 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	CHRNB3	Q05901	458 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	ACSM2A	Q08AH3	577 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	ZNF763	Q0D2J5	394 aa		7.29	□□□□□ -1.24
CKLF-208	ENST00000563092	GGTLC2	Q14390	218 aa		7.29	□□□□□ -1.24

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