RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 C1orf210Q8IVY1 113 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 CCL4L1Q8NHW4 92 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 DUS3LQ96G46 650 aaKnown RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 LCORQ96JN0 433 aaPredicted RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 MUS81Q96NY9 551 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 OR6C1Q96RD1 312 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 IFT46Q9NQC8 304 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 B3GNT3Q9Y2A9 372 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 RPH3AQ9Y2J0 694 aaPredicted RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 HEMK1Q9Y5R4 338 aaPredicted RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 OTOL1A6NHN0 477 aaPredicted RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 MEN1O00255 615 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 PHYHO14832 338 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 SBK2P0C263 348 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 ITGAMP11215 1152 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 S100PP25815 95 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 CD1CP29017 333 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 C21orf58P58505 322 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 CRYZQ08257 329 aaKnown RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 EIF3IQ13347 325 aaKnown RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 CBFBQ13951 182 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 NKAIN1Q4KMZ8 207 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 SAXO2Q658L1 398 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 SMIM15Q7Z3B0 74 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 OR4C15Q8NGM1 316 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 OR6N1Q8NGY5 312 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 DDIT4LQ96D03 193 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 GON7Q9BXV9 100 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 QRSL1Q9H0R6 528 aaKnown RBP7.05□□□□□ -1.28
TCF4-216ENST00000562680 MUTYHQ9UIF7 546 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 FBXO4Q9UKT5 387 aa7.05□□□□□ -1.28
TCF4-216ENST00000562680 CDK2AP1O14519 115 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 GMFGO60234 142 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ITGA10O75578 1167 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 MT-ND5P03915 603 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 EPHA8P29322 1005 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 UQCRC1P31930 480 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ARRB2P32121 409 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR1D4P47884 311 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CXCR4P61073 352 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CD47Q08722 323 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 IHHQ14623 411 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ESCO2Q56NI9 601 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 C18orf63Q68DL7 685 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 WBP2NLQ6ICG8 309 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 KCTD18Q6PI47 426 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 GOT1L1Q8NHS2 421 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 SLC38A5Q8WUX1 472 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 TMEM9BQ9NQ34 198 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CDH10Q9Y6N8 788 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR6C76A6NM76 312 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 SOX14O95416 240 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 MSR1P21757 451 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 PPP3R1P63098 170 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 NDUFAF6Q330K2 333 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 PROX2Q3B8N5 592 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 FAM69BQ5VUD6 431 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 P4HA3Q7Z4N8 544 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR5J2Q8NH18 312 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 IFI44Q8TCB0 444 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 TMEM239Q8WW34 195 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ATOH1Q92858 354 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 FBXL20Q96IG2 436 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR10A5Q9H207 317 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 NMNAT1Q9HAN9 279 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 SIAEQ9HAT2 523 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 BCL2L10Q9HD36 194 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CD93Q9NPY3 652 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 MED11Q9P086 117 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 BLOC1S5-TXNDC5H3BN57 136 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 SOX1O00570 391 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 TRAPPC6AO75865 159 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 PLGP00747 810 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 THBS1P07996 1170 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ITGA3P26006 1051 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 MAPK3P27361 379 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 RAB2AP61019 212 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 RPTNQ6XPR3 784 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ADGRF3Q8IZF5 1079 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR5D16Q8NGK9 328 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR5M3Q8NGP4 307 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 OR2T4Q8NH00 348 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CHPT1Q8WUD6 406 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 BCL7BQ9BQE9 202 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ULBP3Q9BZM4 244 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.04□□□□□ -1.28
TCF4-216ENST00000562680 FOLH1BQ9HBA9 442 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 SLC6A20Q9NP91 592 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 PAQR5Q9NXK6 330 aaPredicted RBP7.04□□□□□ -1.28
TCF4-216ENST00000562680 SLAMF8Q9P0V8 285 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 TMPRSS11EQ9UL52 423 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 A0A1W2PR48 441 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 ACOX3O15254 700 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 RNF13O43567 381 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 TMPRSS11DO60235 418 aa7.04□□□□□ -1.28
TCF4-216ENST00000562680 CDC40O60508 579 aaKnown RBP eCLIP7.04□□□□□ -1.28
TCF4-216ENST00000562680 ALOX12BO75342 701 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms