RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ANXA5P08758 320 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 AOAHP28039 575 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PBLDP30039 288 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PTGFRP43088 359 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 CDK6Q00534 326 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DCST1Q5T197 706 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 SERPINA12Q8IW75 414 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 HDDC3Q8N4P3 179 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 MEIOBQ8N635 442 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 OR14A16Q8NHC5 309 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PAPOLGQ9BWT3 736 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 GPR52Q9Y2T5 361 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF106Q9H2Y7 1883 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 A0A1B0GW55 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PRAMEF2O60811 474 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PRPH2P23942 346 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 S100PP25815 95 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 THBS2P35442 1172 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 RAD52P43351 418 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 MTNR1AP48039 350 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 OR10A3P58181 314 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 SNTB1Q13884 538 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF791Q3KP31 576 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC22A10Q63ZE4 541 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 TRMT10AQ8TBZ6 339 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 GNPDA2Q8TDQ7 276 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 THAP4Q8WY91 577 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 LCORQ96JN0 433 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 DUX4Q9UBX2 424 aa13.08□□□□□ -0.32
GTF3C1-203ENST00000562609 NINQ8N4C6 2090 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 PRMT3O60678 531 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 GAAP10253 952 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 OPRD1P41143 372 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC1A3P43003 542 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 CCDC157Q569K6 752 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 PRAMEF13Q5VWM6 474 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 IL36AQ9UHA7 158 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 PLEKHM1Q9Y4G2 1056 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 IGHV2-70P01814 119 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 ELAVL4P26378 380 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 SYTL3Q4VX76 610 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 EOGTQ5NDL2 527 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 AVPI1Q5T686 147 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 PGBD2Q6P3X8 592 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 USP53Q70EK8 1073 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 PRICKLE2Q7Z3G6 844 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 OR51Q1Q8NH59 317 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 UBTD2Q8WUN7 234 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 KCND3Q9UK17 655 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
GTF3C1-203ENST00000562609 OR2M5A3KFT3 312 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SCAMP2O15127 329 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 ARPC1BO15143 372 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 TSPAN6O43657 245 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PRAMEF4O60810 478 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PRAF2O60831 178 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SNAPC5O75971 98 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 S100A8P05109 93 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 ADH5P11766 374 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.325e-6■■■■■ 34.8
GTF3C1-203ENST00000562609 SHC1P29353 583 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 MTNR1BP49286 362 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 CAPZA1P52907 286 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 OC90Q02509 493 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PRAMEF9Q5VWM5 478 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC6A19Q695T7 634 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PRSS45Q7RTY3 260 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SPICQ8N5J4 248 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 FBXO15Q8NCQ5 510 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 IFT27Q9BW83 186 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM121BQ9BXQ6 578 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 GSDMCQ9BYG8 508 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PRMT8Q9NR22 394 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 NANSQ9NR45 359 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SDHAF3Q9NRP4 125 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 IGLV3-16A0A075B6K0 115 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 KCNE1BA0A087WTH5 132 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM82A0PJX8 343 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms