RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 YES1P07947 543 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 SRD5A1P18405 259 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 TAC1P20366 129 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 FABP6P51161 128 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 PSPHP78330 225 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 LCP2Q13094 533 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 C11orf71Q6IPW1 123 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 C8orf74Q6P047 294 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 LRIG3Q6UXM1 1119 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 HMGN2P46Q86SG4 172 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 DTX2Q86UW9 622 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 UBE2J2Q8N2K1 259 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 OR10H5Q8NGA6 315 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 ZFP90Q8TF47 636 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 FAM168AQ92567 244 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 TSSK3Q96PN8 268 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 OR5B2Q96R09 309 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 PSD2Q9BQI7 771 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 HDHD5Q9BXW7 423 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 AMBRA1Q9C0C7 1298 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 C3orf14Q9HBI5 128 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 BARX1Q9HBU1 254 aaPredicted RBP10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 EML4Q9HC35 981 aaKnown RBP10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 SH3BP4Q9P0V3 963 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 GIMAP2Q9UG22 337 aa10.31□□□□□ -0.76
NSMCE1-202ENST00000561960 CCT8L1PA6NM43 557 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SMAD9O15198 467 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 WIPF1O43516 503 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 TMCC2O75069 709 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SEC22BO75396 215 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SKAP2O75563 359 aaPredicted RBP10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 CRCPO75575 148 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 CYP7B1O75881 506 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 H6PDO95479 791 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 IMPDH1P20839 514 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 GCAP28676 217 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SLC7A1P30825 629 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 CASQ1P31415 396 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 RASGEF1BQ0VAM2 473 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 RAB35Q15286 201 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 RNPS1Q15287 305 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 FAM120AOSQ5T036 256 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 AGAP6Q5VW22 663 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 CYB5R2Q6BCY4 276 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 GTF2IRD2BQ6EKJ0 949 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 GALNT18Q6P9A2 607 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SYT10Q6XYQ8 523 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 GTF2IRD2Q86UP8 949 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 TRABD2AQ86V40 505 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 ZNF100Q8IYN0 542 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.3□□□□□ -0.762e-6■■■■■ 26.8
NSMCE1-202ENST00000561960 MUCL1Q96DR8 90 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 RADILQ96JH8 1075 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 ADAD1Q96M93 576 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SOX7Q9BT81 388 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 OR10A4Q9H209 315 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 FAIMQ9NVQ4 179 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 PAQR5Q9NXK6 330 aaPredicted RBP10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 SNX8Q9Y5X2 465 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 ATP23Q9Y6H3 246 aa10.3□□□□□ -0.76
NSMCE1-202ENST00000561960 CENPVL1A0A0U1RR11 272 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 LOC100289279A0A1B0GTE1 492 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 C7orf72A4D263 438 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 GTPBP1O00178 669 aaKnown RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 KIAA0513O60268 411 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 LMX1BO60663 402 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 RGS9O75916 674 aaPredicted RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 ENO1P06733 434 aaKnown RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 FESP07332 822 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 ALOX5P09917 674 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 GGT1P19440 569 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 ATP5F1P24539 256 aaPredicted RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 TTKP33981 857 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 MAP3K8P41279 467 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 OR3A2P47893 321 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 SERPINB9P50453 376 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 PRKAA2P54646 552 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 POU6F2P78424 691 aaPredicted RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 VLDLRP98155 873 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 LASP1Q14847 261 aaKnown RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 Q6ZSR9 355 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 Q6ZT83 130 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 FBXL14Q8N1E6 418 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 CLEC4FQ8N1N0 589 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 MUC15Q8N387 334 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 ANKS4BQ8N8V4 417 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 OR2T11Q8NH01 316 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 OR5AK3PQ8NH89 298 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 C10orf105Q8TEF2 133 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 MS4A4EQ96PG1 132 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 LRTM1Q9HBL6 345 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 TIGARQ9NQ88 270 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 UBQLN4Q9NRR5 601 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 CBLN4Q9NTU7 201 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 TBK1Q9UHD2 729 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 GRID1Q9ULK0 1009 aa10.29□□□□□ -0.76
NSMCE1-202ENST00000561960 EXOC1LA0A1B0GW35 172 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms