RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 OR5F1O95221 314 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CLPTM1O96005 669 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 IGFBP1P08833 259 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 JUNBP17275 347 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CDH2P19022 906 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 MMP11P24347 488 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CHMP24386 653 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ACP1P24666 158 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ACAA2P42765 397 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 PPICP45877 212 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 GSSP48637 474 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 DUSP3P51452 185 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 NR1H2P55055 460 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 NUP107P57740 925 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 FOXL2P58012 376 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 GABARAPL2P60520 117 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CXCR4P61073 352 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ESRRGP62508 458 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 HOXC5Q00444 222 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ALDH6A1Q02252 535 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 TEKQ02763 1124 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ILKQ13418 452 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 TRA2AQ13595 282 aaKnown RBP eCLIP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 LARS2Q15031 903 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ELAVL1Q15717 326 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 GPR68Q15743 365 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 NADK2Q4G0N4 442 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ENTPD8Q5MY95 495 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 DCST1Q5T197 706 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 MRPL2Q5T653 305 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ARHGAP40Q5TG30 622 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 STPG1Q5TH74 334 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 FNDC7Q5VTL7 733 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 LCN10Q6JVE6 187 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 C1orf94Q6P1W5 598 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 BORAQ6PGQ7 559 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF773Q6PK81 442 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 GDF7Q7Z4P5 450 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SLCO6A1Q86UG4 719 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SATL1Q86VE3 508 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 DMRTC2Q8IXT2 367 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ENTHD1Q8IYW4 607 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 NLGN4XQ8N0W4 816 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 AMER2Q8N7J2 671 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 BCORP1Q8N888 145 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF441Q8N8Z8 693 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 POGLUT1Q8NBL1 392 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 C7orf57Q8NEG2 295 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 NFAM1Q8NET5 270 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 RHOXF1Q8NHV9 184 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CNIH3Q8TBE1 160 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SLC2A12Q8TD20 617 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 CNOT9Q92600 299 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SLC35B4Q969S0 331 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 PSMG3-AS1Q96PY0 264 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 OR6C1Q96RD1 312 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 LMF1Q96S06 567 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SLX1AQ9BQ83 275 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 NUDT9Q9BW91 350 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ITPAQ9BY32 194 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 UCK2Q9BZX2 261 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 POLR2J2Q9GZM3 115 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 FAM192AQ9GZU8 254 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 POLR2J3Q9H1A7 115 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 DUSP21Q9H596 190 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SYNDIG1Q9H7V2 258 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 EVA1AQ9H8M9 152 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 FANCEQ9HB96 536 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 APMAPQ9HDC9 416 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ZFP64Q9NPA5 681 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 FKBP14Q9NWM8 211 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 OCIAD1Q9NX40 245 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 AASSQ9UDR5 926 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF223Q9UK11 482 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 PPIEQ9UNP9 301 aaKnown RBP6.02□□□□□ -1.45
CAPN3-210ENST00000561817 RNF6Q9Y252 685 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ORC6Q9Y5N6 252 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 GMPPBQ9Y5P6 360 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 SPEGQ15772 3267 aa6.02□□□□□ -1.45
CAPN3-210ENST00000561817 ZFHX2Q9C0A1 2572 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SMIM31A0A1B0GVY4 71 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CPSF4LA6NMK7 179 aaKnown RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 MASP2O00187 686 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 SLC1A7O00341 560 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CDX4O14627 284 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 TO15178 435 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PRKNO60260 465 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CBFA2T3O75081 653 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 IL33O95760 270 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 IFNA16P05015 189 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 GP1BAP07359 652 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 ZGLP1P0C6A0 271 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 OSMP13725 252 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 CD59P13987 128 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 ATP6V1B1P15313 513 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 PCMT1P22061 227 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 ACVR2AP27037 513 aa6.01□□□□□ -1.45
CAPN3-210ENST00000561817 OMPP47874 163 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms