RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CARD18P57730 90 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 PHC1P78364 1004 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 FOXF1Q12946 379 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 STX3Q13277 289 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 KEAP1Q14145 624 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 TOMM34Q15785 309 aaPredicted RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 EXOC3L2Q2M3D2 409 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 NDUFAF6Q330K2 333 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 HBMQ6B0K9 141 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 BHLHB9Q6PI77 547 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 C22orf34Q6ZV56 151 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 TGIF2LYQ8IUE0 185 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 CHDHQ8NE62 594 aaPredicted RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 OR8J2Q8NGG1 315 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 OR4A15Q8NGL6 344 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 FBXO27Q8NI29 283 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 ZNF524Q96C55 264 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 GMPPAQ96IJ6 420 aaPredicted RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 SDF2Q99470 211 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 PAIP2Q9BPZ3 127 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 MED18Q9BUE0 208 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 NUF2Q9BZD4 464 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 DPY30Q9C005 99 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 PNPOQ9NVS9 261 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 HAO1Q9UJM8 370 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 MCTS1Q9ULC4 181 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 EMC9Q9Y3B6 208 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 DTNAQ9Y4J8 743 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 ACTL7BQ9Y614 415 aa9.21□□□□□ -0.94
CLK3-205ENST00000561673 PRRC2AP48634 2157 aaKnown RBP9.21□□□□□ -0.94
CLK3-205ENST00000561673 RNF103-CHMP3A0A140T963 221 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 PRSS51A0A1B0GVH4 220 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 DUXAA6NLW8 204 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 DEFB108AA8MXU0 73 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ANKRD28O15084 1053 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 FCMRO60667 390 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 SYNGR4O95473 234 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 NID1P14543 1247 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 CD53P19397 219 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 KLK2P20151 261 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 CRYGSP22914 178 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ADH6P28332 368 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 SFTPDP35247 375 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 CTBP2P56545 445 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 RIPPLY3P57055 190 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 DEFB113Q30KQ7 82 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ARHGAP11BQ3KRB8 267 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 PDSS1Q5T2R2 415 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 PDZK1Q5T2W1 519 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ANKRD34AQ69YU3 496 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 OLIG3Q7RTU3 272 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ZNF550Q7Z398 422 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ANKRD46Q86W74 232 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ZNF614Q8N883 585 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 OR6K3Q8NGY3 331 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 OR5W2Q8NH69 310 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ROBO4Q8WZ75 1007 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 KLHL4Q9C0H6 718 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 NMUR2Q9GZQ4 415 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 MEAF6Q9HAF1 191 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 GLRX2Q9NS18 164 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 ZNF226Q9NYT6 803 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 KCNE5Q9UJ90 142 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 MKLN1Q9UL63 735 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 PCDHGB4Q9UN71 923 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 GPC6Q9Y625 555 aaPredicted RBP9.2□□□□□ -0.94
CLK3-205ENST00000561673 MTORP42345 2549 aa9.2□□□□□ -0.94
CLK3-205ENST00000561673 SERINC4A6NH21 518 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ESPNB1AK53 854 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ZNF264O43296 627 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 EIF4E2O60573 245 aaKnown RBP9.19□□□□□ -0.94
CLK3-205ENST00000561673 STX11O75558 287 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 NTN1O95631 604 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 CPSF4O95639 269 aaKnown RBP9.19□□□□□ -0.94
CLK3-205ENST00000561673 AK1P00568 194 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 TUBBP07437 444 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 OR12D1P0DN82 309 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 PRKCAP17252 672 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 LBPP18428 481 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 UQCRC2P22695 453 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ELK4P28324 431 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 SUMO3P55854 103 aaPredicted RBP9.19□□□□□ -0.94
CLK3-205ENST00000561673 NME5P56597 212 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 WDR4P57081 412 aaKnown RBP9.19□□□□□ -0.94
CLK3-205ENST00000561673 ADAM8P78325 824 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 BST1Q10588 318 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 CASP8Q14790 479 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 GPR68Q15743 365 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ZNF141Q15928 474 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 TMEM176BQ3YBM2 270 aaPredicted RBP9.19□□□□□ -0.94
CLK3-205ENST00000561673 SPANXN4Q5MJ08 99 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ANXA8L1Q5VT79 327 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 HHATQ5VTY9 493 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 GTF2IRD2BQ6EKJ0 949 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 HEPHL1Q6MZM0 1159 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 STAC2Q6ZMT1 411 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 GTF2IRD2Q86UP8 949 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 LRRC34Q8IZ02 419 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ANKRD42Q8N9B4 389 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms