RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ZSWIM7Q19AV6 140 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 GLIPR1L2Q4G1C9 344 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 LIN52Q52LA3 116 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 KRTCAP3Q53RY4 240 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 CMPK2Q5EBM0 449 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 WIPI1Q5MNZ9 446 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-221ENST00000561276 ARSKQ6UWY0 536 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 SIAH3Q8IW03 269 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 FAM109AQ8N4B1 249 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 TMCO5AQ8N6Q1 288 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 FAM71CQ8NEG0 241 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 FAM83FQ8NEG4 500 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-221ENST00000561276 BHLHE22Q8NFJ8 381 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-221ENST00000561276 OR5W2Q8NH69 310 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 GPR119Q8TDV5 335 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 RASSF5Q8WWW0 418 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 NR4A3Q92570 626 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 TAMM41Q96BW9 452 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 ARSGQ96EG1 525 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 CLPTM1LQ96KA5 538 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 KLHDC3Q9BQ90 382 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 PINK1Q9BXM7 581 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 PCDHAC1Q9H158 963 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 ZDHHC11Q9H8X9 412 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 ACKR4Q9NPB9 350 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 PRPF19Q9UMS4 504 aaKnown RBP9.34□□□□□ -0.91
LRRC28-221ENST00000561276 CNTRLQ7Z7A1 2325 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 IGSF10Q6WRI0 2623 aa9.34□□□□□ -0.91
LRRC28-221ENST00000561276 ANKUB1A6NFN9 424 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 ADAM11O75078 769 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 GMNNO75496 209 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 DNAJC8O75937 253 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 PDE5AO76074 875 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 EPPINO95925 133 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 FESP07332 822 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 C8BP07358 591 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 LINGO3P0C6S8 592 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 GKN3PP0CG01 181 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 HK1P19367 917 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 SRD5A2P31213 254 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 CCR4P51679 360 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 SELENOWP63302 87 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 GABPB1Q06547 395 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 CBFBQ13951 182 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 ELOAQ14241 798 aaKnown RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 TRIM25Q14258 630 aaKnown RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 TOMM34Q15785 309 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 FXNQ16595 210 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 LRRC23Q53EV4 343 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 RNF220Q5VTB9 566 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 DHRS4L2Q6PKH6 230 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 YRDCQ86U90 279 aaKnown RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 COMTD1Q86VU5 262 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 TOR1AIP2Q8NFQ8 470 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 OR14L1PQ8NHC6 308 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 C1GALT1C1Q96EU7 318 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 DTNBP1Q96EV8 351 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 CADM1Q9BY67 442 aaKnown RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 LDAHQ9H6V9 325 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 GORASP2Q9H8Y8 452 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 EXOSC3Q9NQT5 275 aaKnown RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 DNAJB12Q9NXW2 375 aaKnown RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 TAS2R10Q9NYW0 307 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 DKKL1Q9UK85 242 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 VDAC3Q9Y277 283 aa9.33□□□□□ -0.92
LRRC28-221ENST00000561276 RPH3AQ9Y2J0 694 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-221ENST00000561276 A0A087WZY1 265 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 TRGV5A0A0B4J1U4 118 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 CFAP73A6NFT4 308 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 TMEM229AB2RXF0 380 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 AP3D1O14617 1153 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 FRS3O43559 492 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 SUSD5O60279 629 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 LGI1O95970 557 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 SERPINA1P01009 418 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 IGHG3P01860 377 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 PRG2P13727 222 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 PGCP20142 388 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 CD247P20963 164 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 TCEA1P23193 301 aaKnown RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 ACAA2P42765 397 aaKnown RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 IDH2P48735 452 aaKnown RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF41P51814 821 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 TDGF1P3P51864 188 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 SUMO3P55854 103 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 NCALDP61601 193 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 MS4A2Q01362 244 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 TLE1Q04724 770 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 GANABQ14697 944 aaKnown RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 GLYR1Q49A26 553 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-221ENST00000561276 EIPR1Q53HC9 387 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 CYBRD1Q53TN4 286 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 PGM2L1Q6PCE3 622 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 CBLL1Q75N03 491 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF550Q7Z398 422 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 PRICKLE2Q7Z3G6 844 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 ZNF440Q8IYI8 595 aa9.32□□□□□ -0.92
LRRC28-221ENST00000561276 GPR32P1Q8NGA4 272 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms