RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CASD1Q96PB1 797 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 OR1F2PQ96R84 312 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 IFT27Q9BW83 186 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 PINK1Q9BXM7 581 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 CDHR4A6H8M9 788 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 ANTXRLA6NF34 631 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 RPLP2P05387 115 aaKnown RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 CLUP10909 449 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 POLR2LP62875 67 aaKnown RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 FGL2Q14314 439 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 CLRN3Q8NCR9 226 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 RGMAQ96B86 450 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 TIFAQ96CG3 184 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 AMDHD1Q96NU7 426 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 CAMK1GQ96NX5 476 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 DERL3Q96Q80 235 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 BBS4Q96RK4 519 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 GINS4Q9BRT9 223 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 ZCCHC4Q9H5U6 513 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 EVA1AQ9H8M9 152 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 TAC3Q9UHF0 121 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 PRELID3BQ9Y3B1 194 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 PLPP2O43688 288 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 SPDEFO95238 335 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 THY1P04216 161 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 HMGN1P05114 100 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 RGS8P57771 180 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 UBE2MP61081 183 aaKnown RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 SEC61A1P61619 476 aaKnown RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 PDZD9Q8IXQ8 264 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 OR1S1Q8NH92 325 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 ACOT11Q8WXI4 607 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 PELOQ9BRX2 385 aaKnown RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 DPH1Q9BZG8 443 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 OR2AG1Q9H205 316 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 ZNF334Q9HCZ1 680 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 LHX9Q9NQ69 397 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 MED17Q9NVC6 651 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 A0A1B0GUH1 482 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 A0A1W2PS29 197 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 FLRT2O43155 660 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 HYAL3O43820 417 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 PRAF2O60831 178 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 B3GALNT1O75752 331 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 GIPP09681 153 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 PRG2P13727 222 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 HCCSP53701 268 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 HES5Q5TA89 166 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 ZNF613Q6PF04 617 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 PAQR7Q86WK9 346 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 FIBINQ8TAL6 211 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 ATOH1Q92858 354 aaPredicted RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 MRPS24Q96EL2 167 aaKnown RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 FERD3LQ96RJ6 166 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 MCHR1Q99705 422 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 USB1Q9BQ65 265 aaKnown RBP15.33■□□□□ 0.04
TPM1-228ENST00000560975 MED9Q9NWA0 146 aa15.33■□□□□ 0.04
TPM1-228ENST00000560975 ANAPC1Q9H1A4 1944 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 ZNF98A6NK75 572 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 KIAA0355O15063 1070 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 LDOC1O95751 146 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 WDPCPO95876 746 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 GYPBP06028 91 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 ZGLP1P0C6A0 271 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 CBX5P45973 191 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 ELAVL2Q12926 359 aaKnown RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 LINC00303Q3SY05 128 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 FAM26DQ5JW98 314 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 GLDNQ6ZMI3 551 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 USP50Q70EL3 339 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 GDF7Q7Z4P5 450 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 ADCK2Q7Z695 626 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 PXKQ7Z7A4 578 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 GID4Q8IVV7 300 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 CCDC116Q8IYX3 515 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 LRRC46Q96FV0 321 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 PGLYRP3Q96LB9 341 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 SLC38A3Q99624 504 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 MS4A8Q9BY19 250 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 LSM7Q9UK45 103 aaKnown RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 NPFFR2Q9Y5X5 522 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 GALR3O60755 368 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 SDC3O75056 442 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 IGF2P01344 180 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 UCHL1P09936 223 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 PSMB5P28074 263 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 CLDN2P57739 230 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 RAP2BP61225 183 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 DHODHQ02127 395 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 GK2Q14410 553 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 METTL3Q86U44 580 aaKnown RBP15.32■□□□□ 0.04
TPM1-228ENST00000560975 SLC44A3Q8N4M1 653 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 RFLNBQ8N5W9 214 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 CYB561A3Q8NBI2 242 aa15.32■□□□□ 0.04
TPM1-228ENST00000560975 ZDHHC1Q8WTX9 485 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms