RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TP53INP1Q96A56 240 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 ISOC1Q96CN7 298 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 NMD3Q96D46 503 aaKnown RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
SNX1-211ENST00000560829 CTRCQ99895 268 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 WDR54Q9H977 334 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 ACOT13Q9NPJ3 140 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 CDH10Q9Y6N8 788 aa11.87□□□□□ -0.51
SNX1-211ENST00000560829 SCN2AQ99250 2005 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 ADAMTS9Q9P2N4 1935 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 TRIM64BA6NI03 449 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 ZNF99A8MXY4 864 aaPredicted RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 B4E171 279 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 AGRPO00253 132 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 SCDO00767 359 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 CDC42EP2O14613 210 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 SLC5A2P31639 672 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 TSPAN7P41732 249 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 NUDT6P53370 316 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 GP2P55259 537 aaKnown RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 TBCEQ15813 527 aaPredicted RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 MEDAGQ5VYS4 303 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 FAAH2Q6GMR7 532 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 TMEM205Q6UW68 189 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 MEX3DQ86XN8 651 aaKnown RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 IQCF1Q8N6M8 205 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 APCDD1LQ8NCL9 501 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 B3GNT7Q8NFL0 401 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 BRIX1Q8TDN6 353 aaKnown RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 METTL21AQ8WXB1 218 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 RORBQ92753 470 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 ATOH1Q92858 354 aaPredicted RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 RNF31Q96EP0 1072 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 IL4I1Q96RQ9 567 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 CCNL2Q96S94 520 aaPredicted RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 WDR77Q9BQA1 342 aaPredicted RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 PRRG3Q9BZD7 231 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 TVP23BQ9NYZ1 205 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 NXT1Q9UKK6 140 aaKnown RBP11.86□□□□□ -0.51
SNX1-211ENST00000560829 MED31Q9Y3C7 131 aa11.86□□□□□ -0.51
SNX1-211ENST00000560829 SPEGQ15772 3267 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 VPS13AQ96RL7 3174 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 COL5A1P20908 1838 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 A0A1W2PQD3 144 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 ENTPD6O75354 484 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 INMTO95050 263 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 UBL4AP11441 157 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 CCL4P13236 92 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 HPGDP15428 266 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 NR0B1P51843 470 aaKnown RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 PNLIPRP2P54317 469 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 TMBIM6P55061 237 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 FOXL2P58012 376 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 RNF4P78317 190 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 SKP2Q13309 424 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 CD226Q15762 336 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 UBE2UQ5VVX9 321 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 LCN10Q6JVE6 187 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 KIRREL2Q6UWL6 708 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 APOOLQ6UXV4 268 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 TCEANCQ8N8B7 351 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 PFN4Q8NHR9 129 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 GRHL3Q8TE85 626 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 DNAJA4Q8WW22 397 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 FCGR1BQ92637 280 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 ADOQ96SZ5 270 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 MEPEQ9NQ76 525 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 GPR83Q9NYM4 423 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 R4GN57 208 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 UNC119BA6NIH7 251 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 PRKYO43930 277 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 GDF9O60383 454 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 REM1O75628 298 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 IFI30P13284 250 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 CD59P13987 128 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 ZNF28P17035 718 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 MAKP20794 623 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 IL12BP29460 328 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 MAP2K4P45985 399 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 NUBP1P53384 320 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 SH3BGRP55822 239 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 PLCXD2Q0VAA5 305 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 IRF3Q14653 427 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 NDUFAF6Q330K2 333 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 GPR107Q5VW38 600 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 RPL13AP3Q6NVV1 102 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 ZNF517Q6ZMY9 492 aaPredicted RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 CDK20Q8IZL9 346 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 OR8K3Q8NH51 312 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 NUBPLQ8TB37 319 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 C12orf43Q96C57 262 aaKnown RBP11.85□□□□□ -0.51
SNX1-211ENST00000560829 BPIFA2Q96DR5 249 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 OMA1Q96E52 524 aa11.85□□□□□ -0.51
SNX1-211ENST00000560829 CRB3Q9BUF7 120 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms