RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 NAE1Q13564 534 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 GPR176Q14439 515 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 MFSD13AQ14CX5 517 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 AANATQ16613 207 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 PLA2G2CQ5R387 149 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 ELFN2Q5R3F8 820 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 AGBL4Q5VU57 503 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 LYSMD4Q5XG99 296 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 FAM219BQ5XKK7 198 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 LAMTOR1Q6IAA8 161 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 TCTN3Q6NUS6 607 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 ADAMTSL4Q6UY14 1074 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 DEF8Q6ZN54 512 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 SLCO4C1Q6ZQN7 724 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 TRILQ7L0X0 811 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 CACUL1Q86Y37 369 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 OR6V1Q8N148 313 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 HDDC3Q8N4P3 179 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 DEFB119Q8N690 84 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 ARIH2OSQ8N7S6 290 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 FAM71CQ8NEG0 241 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 TTLQ8NG68 377 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 OR4K5Q8NGD3 323 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 SLC2A12Q8TD20 617 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 NUDT8Q8WV74 236 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 APOBEC4Q8WW27 367 aaKnown RBP7.99□□□□□ -1.13
CCDC33-209ENST00000560565 SLC5A11Q8WWX8 675 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 PIGKQ92643 395 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 GLYATL1Q969I3 302 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 RNF31Q96EP0 1072 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 GFM1Q96RP9 751 aaKnown RBP7.99□□□□□ -1.13
CCDC33-209ENST00000560565 PKP4Q99569 1192 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 WACQ9BTA9 647 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 RIOK2Q9BVS4 552 aaKnown RBP7.99□□□□□ -1.13
CCDC33-209ENST00000560565 BEX2Q9BXY8 128 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 GHITMQ9H3K2 345 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 SMOC1Q9H4F8 434 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 PELI2Q9HAT8 420 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 TMEM184CQ9NVA4 438 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 RDH8Q9NYR8 311 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 TAS2R16Q9NYV7 291 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 MED11Q9P086 117 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 ATPIF1Q9UII2 106 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
CCDC33-209ENST00000560565 NPTNQ9Y639 398 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 ASCC3Q8N3C0 2202 aaKnown RBP7.99□□□□□ -1.13
CCDC33-209ENST00000560565 LOC400499M0QZD8 3231 aa7.99□□□□□ -1.13
CCDC33-209ENST00000560565 TNRC6BQ9UPQ9 1833 aaKnown RBP7.99□□□□□ -1.13
CCDC33-209ENST00000560565 A0A0X1KG70 313 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 A0A1W2PPL8 197 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 hCG_1807616A0A1W2PRN6 198 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SLC22A31A6NKX4 558 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 KHNYNO15037 678 aaKnown RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 PLRG1O43660 514 aaKnown RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 GDF9O60383 454 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 GATBO75879 557 aaKnown RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 TCRBP04435 133 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 BCHEP06276 602 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 GIPP09681 153 aaPredicted RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SULT1A3P0DMM9 295 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SULT1A4P0DMN0 295 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 NR2F1P10589 423 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 IFI30P13284 250 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF8P17098 575 aaPredicted RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 NTSP30990 170 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 GPR1P46091 355 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF81P51508 661 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 TAS2R50P59544 299 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 RPS21P63220 83 aaKnown RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 EFNB1P98172 346 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 FABP5Q01469 135 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 DHODHQ02127 395 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SCRN3Q0VDG4 424 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 RPA4Q13156 261 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ARHGAP19Q14CB8 494 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 MAPK14Q16539 360 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 CCDC157Q569K6 752 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 BCL2L15Q5TBC7 163 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 RAET1GQ6H3X3 334 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ARSKQ6UWY0 536 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 OVCH2Q7RTZ1 564 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SLC38A6Q8IZM9 456 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SPICQ8N5J4 248 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 TBC1D19Q8N5T2 526 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ACBD7Q8N6N7 88 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF655Q8N720 491 aaPredicted RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 KCT2Q8NC54 265 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 OR2T33Q8NG76 320 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 OR56A1Q8NGH5 318 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 OR52L1Q8NGH7 329 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SLC38A5Q8WUX1 472 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SMPDL3AQ92484 453 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 THRSPQ92748 146 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 FOXJ1Q92949 421 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 RGMAQ96B86 450 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 CLIP3Q96DZ5 547 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 SGTBQ96EQ0 304 aa7.98□□□□□ -1.13
CCDC33-209ENST00000560565 TOE1Q96GM8 510 aaKnown RBP7.98□□□□□ -1.13
CCDC33-209ENST00000560565 TMEM19Q96HH6 336 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms