RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 NUP43Q8NFH3 380 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 CEP70Q8NHQ1 597 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 ZFP28Q8NHY6 868 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 TMEM237Q96Q45 408 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 IQCGQ9H095 443 aaKnown RBP9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 MYNNQ9NPC7 610 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 KLHL9Q9P2J3 617 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 PRSS50Q9UI38 385 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 KCNS2Q9ULS6 477 aa9.3□□□□□ -0.92
CDC42BPB-207ENST00000560492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.3□□□□□ -0.922e-8■■□□□ 12.1
CDC42BPB-207ENST00000560492 CIB4A0PJX0 185 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 C7orf72A4D263 438 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CCT8L1PA6NM43 557 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 SHISA9B4DS77 424 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 GTPBP1O00178 669 aaKnown RBP9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 LMX1BO60663 402 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 PSMG1O95456 288 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 GSTA1P08263 222 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 ALOX5P09917 674 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 GGT1P19440 569 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 HNF1AP20823 631 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 ATP6V1C1P21283 382 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 EIF1P41567 113 aaKnown RBP9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 MAGEA12P43365 314 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 ZNF83P51522 516 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CCR4P51679 360 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 MANFP55145 182 aaKnown RBP9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 PKNOX1P55347 436 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 VLDLRP98155 873 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CHRNEQ04844 493 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 LCP2Q13094 533 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CARTPTQ16568 116 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CCNJQ5T5M9 372 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 FAM71E1Q6IPT2 247 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 C8orf74Q6P047 294 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 GALNT18Q6P9A2 607 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 TMEM108Q6UXF1 575 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 DNM1P46Q6ZS02 220 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 Q6ZT83 130 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 TDRPQ86YL5 185 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 MISPQ8IVT2 679 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 SLC43A2Q8N370 569 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 ARIH2OSQ8N7S6 290 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CDRT4Q8N9R6 151 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 OR52N5Q8NH56 324 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 FBXO27Q8NI29 283 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 POC1BQ8TC44 478 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 ACTRT2Q8TDY3 377 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 ZFP90Q8TF47 636 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 C3orf49Q96BT1 292 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 C1QTNF3Q9BXJ4 246 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 MID1IP1Q9NPA3 183 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 UBQLN4Q9NRR5 601 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 CBLN4Q9NTU7 201 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 GIN1Q9NXP7 522 aa9.29□□□□□ -0.92
CDC42BPB-207ENST00000560492 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 H3BNH8 94 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 M0R1B8 84 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 ZNF195O14628 629 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 AKAP10O43572 662 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 KIAA0513O60268 411 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 SEC22BO75396 215 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 RAD51DO75771 328 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 KCNK2O95069 426 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 NKX2-2O95096 273 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 SBK3P0C264 359 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 ACP2P11117 423 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 PSMA4P25789 261 aaKnown RBP9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 ELK4P28324 431 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 SERPINB4P48594 390 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 POU6F2P78424 691 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 LOXL1Q08397 574 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 RASGEF1BQ0VAM2 473 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 GGTLC2Q14390 218 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 CD226Q15762 336 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 FAM166AQ6J272 317 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 KLHL17Q6TDP4 642 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 SLC22A9Q8IVM8 553 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 MUC15Q8N387 334 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 ZNF527Q8NB42 609 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 CIDECQ96AQ7 238 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 PPCDCQ96CD2 204 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 RADILQ96JH8 1075 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 MS4A4EQ96PG1 132 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 KLHDC3Q9BQ90 382 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 CDC42EP4Q9H3Q1 356 aaKnown RBP9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 TMEM216Q9P0N5 145 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 SH3BP4Q9P0V3 963 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 MGAT4BQ9UQ53 548 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 ATP23Q9Y6H3 246 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 MALRD1Q5VYJ5 2156 aa9.28□□□□□ -0.92
CDC42BPB-207ENST00000560492 NPIPA5A0A0B4J1W7 369 aa9.27□□□□□ -0.93
CDC42BPB-207ENST00000560492 A0A1W2PR80 420 aa9.27□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF814B7Z6K7 855 aa9.27□□□□□ -0.93
CDC42BPB-207ENST00000560492 NPIPA7E9PJI5 369 aa9.27□□□□□ -0.93
CDC42BPB-207ENST00000560492 IGHV3-9P01782 118 aa9.27□□□□□ -0.93
CDC42BPB-207ENST00000560492 NGFRP08138 427 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms