RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CPOQ8IVL8 374 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 ALG8Q9BVK2 526 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 ARMC1Q9NVT9 282 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 YARS2Q9Y2Z4 477 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 FBP2O00757 339 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 KIAA0513O60268 411 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 PTHP01270 115 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 RAB3BP20337 219 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 PAGE3Q5JUK9 113 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 NKAIN2Q5VXU1 208 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 COMTD1Q86VU5 262 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 LRRC20Q8TCA0 184 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 CHFRQ96EP1 664 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 MYADMQ96S97 322 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 CLCA1A8K7I4 914 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 HTR3BO95264 441 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 OR7D2Q96RA2 312 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 R3HDMLQ9H3Y0 253 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 OBP2AQ9NY56 170 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 TDRD15B5MCY1 1934 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 C12orf71A8MTZ7 269 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 GABBR2O75899 941 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 TPMTP51580 245 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 XKRXQ6PP77 449 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 RSC1A1Q92681 617 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 BPIFA2Q96DR5 249 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 SYT3Q9BQG1 590 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 PRKYO43930 277 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 LPLP06858 475 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 RGS6P49758 472 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 SSR4P51571 173 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 GPR18Q14330 331 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 NMNAT1Q9HAN9 279 aaPredicted RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 GPR83Q9NYM4 423 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 SLC1A7O00341 560 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 SLC5A2P31639 672 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 MMP12P39900 470 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 TAZQ16635 292 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 CCNJQ5T5M9 372 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 ADAMTSL4Q6UY14 1074 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 OR5H2Q8NGV7 314 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 ARRDC2Q8TBH0 407 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 ISOC1Q96CN7 298 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 NXT1Q9UKK6 140 aaKnown RBP12.63□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF337Q9Y3M9 751 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 TLCD2A6NGC4 264 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 PCBD1P61457 104 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ADAMTS19Q8TE59 1207 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 INTS14Q96SY0 518 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 C1GALT1Q9NS00 363 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 CARD8Q9Y2G2 431 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 BORCS7-ASMTA0A0B4J1R7 106 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 CRTAPO75718 401 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 DCTP40126 519 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 MAGEA6P43360 314 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 TMBIM6P55061 237 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ACTBP60709 375 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ACTG1P63261 375 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 MAT1AQ00266 395 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 RNASE10Q5GAN6 216 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 RNF175Q8N4F7 328 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 OR51T1Q8NGJ9 327 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF431Q8TF32 576 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 NPRL2Q8WTW4 380 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ACOT13Q9NPJ3 140 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 CD93Q9NPY3 652 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 GTDC1Q4AE62 458 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM205Q6UW68 189 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 WDR83Q9BRX9 315 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 IGHG1P01857 330 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ATXN1LP0C7T5 689 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 CD27P26842 260 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 SGSHP51688 502 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 HBA1P69905 142 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 GPLD1P80108 840 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 VHLLQ6RSH7 139 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 PDLIM5Q96HC4 596 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 PLEKHJ1Q9NW61 149 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 MYEF2Q9P2K5 600 aaKnown RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-208ENST00000560371 A0A1W2PPW3 197 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 CPZQ66K79 652 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 LINC00696Q6ZRV3 163 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 HAVCR2Q8TDQ0 301 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ADAMTS16Q8TE57 1224 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF264O43296 627 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms