RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 ZNF700Q9H0M5 742 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 AKIRIN1Q9H9L7 192 aaPredicted RBP9.77□□□□□ -0.85
CRTC3-209ENST00000560320 HHATLQ9HCP6 504 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
CRTC3-209ENST00000560320 IMPAD1Q9NX62 359 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 TOR4AQ9NXH8 423 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 DNAJB12Q9NXW2 375 aaKnown RBP9.77□□□□□ -0.85
CRTC3-209ENST00000560320 UBAP1Q9NZ09 502 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 BLOC1S6Q9UL45 172 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 FARSAQ9Y285 508 aaKnown RBP9.77□□□□□ -0.85
CRTC3-209ENST00000560320 TMEM5Q9Y2B1 443 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 NPFFR2Q9Y5X5 522 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 KALRNO60229 2985 aa9.77□□□□□ -0.85
CRTC3-209ENST00000560320 NSG1A0A0A6YYJ2 146 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 A0A1W2PQD3 144 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CDC14CA4D256 554 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 OR6C70A6NIJ9 312 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 C21orf140B9A014 251 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 H3BN98 237 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 ZNF264O43296 627 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 NDUFB5O43674 189 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 EIF4E2O60573 245 aaKnown RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 SEMA7AO75326 666 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 TNFSF15O95150 251 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CLIC3O95833 236 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 GASTP01350 101 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 LINGO3P0C6S8 592 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 ICAM2P13598 275 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 OSMP13725 252 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CSRP1P21291 193 aaKnown RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 MMP11P24347 488 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 RBMS1P29558 406 aaKnown RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 RNF144AP50876 292 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CCR4P51679 360 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CRISP1P54107 249 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CDC42P60953 191 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 BLMHQ13867 455 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 SSPNQ14714 243 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 PCOLCEQ15113 449 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 SEC23BQ15437 767 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 RBM48Q5RL73 367 aaKnown RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 ZNF770Q6IQ21 691 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 NDUFAF7Q7L592 441 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 NUP54Q7Z3B4 507 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 SLCO6A1Q86UG4 719 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 TSPYL5Q86VY4 417 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 TMPRSS12Q86WS5 348 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 RAB43Q86YS6 212 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 MISPQ8IVT2 679 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 NLGN4XQ8N0W4 816 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 CADM2Q8N3J6 435 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 SLC15A4Q8N697 577 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 GATSQ8NAP1 163 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 APCDD1LQ8NCL9 501 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 NLGN4YQ8NFZ3 816 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 OR4C3Q8NH37 302 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 THAP3Q8WTV1 239 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 DNAJA4Q8WW22 397 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 MPP4Q96JB8 637 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 HRASLS5Q96KN8 279 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 LMF1Q96S06 567 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 PITX2Q99697 317 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 NIPSNAP1Q9BPW8 284 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 WDR77Q9BQA1 342 aaPredicted RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 FUZQ9BT04 418 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 PRR14Q9BWN1 585 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 GPR87Q9BY21 358 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 MRPS26Q9BYN8 205 aaKnown RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 LAT2Q9GZY6 243 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 ZNF696Q9H7X3 374 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 EXOSC3Q9NQT5 275 aaKnown RBP9.76□□□□□ -0.85
CRTC3-209ENST00000560320 MAN2C1Q9NTJ4 1040 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 TCFL5Q9UL49 500 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 MED31Q9Y3C7 131 aa9.76□□□□□ -0.85
CRTC3-209ENST00000560320 A0A087WUU8 490 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 IGHV1-45A0A0A0MS14 117 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 SPAARA0A1B0GVQ0 90 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
CRTC3-209ENST00000560320 C9orf172C9J069 976 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 WWP2O00308 870 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 CHP2O43745 196 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 PRKNO60260 465 aaPredicted RBP9.75□□□□□ -0.85
CRTC3-209ENST00000560320 MPZL2O60487 215 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 ICOSLGO75144 302 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 KLF7O75840 302 aaPredicted RBP9.75□□□□□ -0.85
CRTC3-209ENST00000560320 UMODP07911 640 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 PRG2P13727 222 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 CD82P27701 267 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 POU1F1P28069 291 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 HTR2AP28223 471 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 OTX2P32243 289 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 GGT2P36268 569 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 MYBPC1Q00872 1141 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 TSPAN31Q12999 210 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 DNASE1L3Q13609 305 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 KCTD21Q4G0X4 260 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 PLAG1Q6DJT9 500 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 C1orf94Q6P1W5 598 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 ULK3Q6PHR2 472 aa9.75□□□□□ -0.85
CRTC3-209ENST00000560320 KLHL17Q6TDP4 642 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms