RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 OR4A15Q8NGL6 344 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 OSTF1Q92882 214 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 RAB8BQ92930 207 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 PIK3IP1Q96FE7 263 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 PAIP2Q9BPZ3 127 aaKnown RBP15.85■□□□□ 0.13
HDDC3-205ENST00000559898 PRRG4Q9BZD6 226 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 KLHL4Q9C0H6 718 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 OR51I1Q9H343 314 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 C12orf49Q9H741 205 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 COQ10BQ9H8M1 238 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 HAO1Q9UJM8 370 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 MKLN1Q9UL63 735 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 NF1P21359 2839 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 IGHV3-15A0A0B4J1V0 119 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 SDHDO14521 159 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 ZNF195O14628 629 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 SS18L1O75177 396 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-205ENST00000559898 NUDT14O95848 222 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 PRKCAP17252 672 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 LCN1P31025 176 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 P2RX1P51575 399 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 STX3Q13277 289 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 TSC22D1Q15714 1073 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 TNFAIP8L2Q6P589 184 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-205ENST00000559898 MISPQ8IVT2 679 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 ABHD3Q8WU67 409 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 ZG16BQ96DA0 208 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 MBD6Q96DN6 1003 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 SLC35G5Q96KT7 338 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 KLHL15Q96M94 604 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 PRPF18Q99633 342 aaKnown RBP15.84■□□□□ 0.13
HDDC3-205ENST00000559898 MED18Q9BUE0 208 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 DPY30Q9C005 99 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 QRSL1Q9H0R6 528 aaKnown RBP15.84■□□□□ 0.13
HDDC3-205ENST00000559898 PLSCR4Q9NRQ2 329 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 NDRG3Q9UGV2 375 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 DTNAQ9Y4J8 743 aa15.84■□□□□ 0.13
HDDC3-205ENST00000559898 SETD2Q9BYW2 2564 aaPredicted RBP15.83■□□□□ 0.13
HDDC3-205ENST00000559898 A0A1W2PNR3 127 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 TM9SF1O15321 606 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 UGT2B17O75795 530 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 MYZAPP0CAP1 466 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 OR12D1P0DN82 309 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 CRYGSP22914 178 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 EDNRAP25101 427 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 UFM1P61960 85 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 EEF1A1P68104 462 aaKnown RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 MAD2L1Q13257 205 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 KEAP1Q14145 624 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 ZNF239Q16600 458 aaKnown RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 TMEM176BQ3YBM2 270 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 EEF1A1P5Q5VTE0 462 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 STAC2Q6ZMT1 411 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 ESPNLQ6ZVH7 1005 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 NUFIP2Q7Z417 695 aaKnown RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 CXorf67Q86X51 503 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 TMCO5AQ8N6Q1 288 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 CHDHQ8NE62 594 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 OR8J2Q8NGG1 315 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 MGARPQ8TDB4 240 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 DNAJA3Q96EY1 480 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 GMPPAQ96IJ6 420 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 ALPK1Q96QP1 1244 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 WDR55Q9H6Y2 383 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 MEAF6Q9HAF1 191 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 DLL4Q9NR61 685 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 MARCOQ9UEW3 520 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-205ENST00000559898 C2CD3Q4AC94 2353 aa15.83■□□□□ 0.12
HDDC3-205ENST00000559898 MTORP42345 2549 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 GOLGA8QA0A0J9YX86 632 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 GOLGA8OA6NCC3 632 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 CLDN24A6NM45 220 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 GOLGA8NF8WBI6 632 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 C16orf97H3BN30 126 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 GTPBP1O00178 669 aaKnown RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 RNASET2O00584 256 aaKnown RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 CASKO14936 926 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 CYP7B1O75881 506 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 H6PDO95479 791 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 PLAUP00749 431 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 ENPP1P22413 925 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 AGTR1P30556 359 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 CDKN2CP42773 168 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 CARD18P57730 90 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 OCRLQ01968 901 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 SKP2Q13309 424 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 CASP8Q14790 479 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 QPRTQ15274 297 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 SMU1Q2TAY7 513 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 MTERF4Q7Z6M4 381 aaKnown RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 TUSC5Q8IXB3 177 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 OR6K3Q8NGY3 331 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 SMR3AQ99954 134 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 INPP5KQ9BT40 448 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 THUMPD3Q9BV44 507 aaKnown RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 ELOVL5Q9NYP7 299 aa15.82■□□□□ 0.12
HDDC3-205ENST00000559898 ING1Q9UK53 422 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 MCTS1Q9ULC4 181 aaKnown RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-205ENST00000559898 SERINC4A6NH21 518 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms