RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 EPS8Q12929 822 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 SNTA1Q13424 505 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 RIPK1Q13546 671 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 CBFBQ13951 182 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 INPP5JQ15735 1006 aaPredicted RBP9.52□□□□□ -0.89
TPM1-221ENST00000559831 ATP6AP1Q15904 470 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 COL28A1Q2UY09 1125 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 ENTPD8Q5MY95 495 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 FBXW10Q5XX13 1052 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 OR2T5Q6IEZ7 315 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 HMBOX1Q6NT76 420 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 TMEM81Q6P7N7 255 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 PIWIL3Q7Z3Z3 882 aaKnown RBP9.52□□□□□ -0.89
TPM1-221ENST00000559831 TSEN54Q7Z6J9 526 aaKnown RBP9.52□□□□□ -0.89
TPM1-221ENST00000559831 PACS2Q86VP3 889 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 LILRA2Q8N149 483 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 PQLC1Q8N2U9 271 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 MDS2Q8NDY4 140 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 CATSPER1Q8NEC5 780 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 OR2T29Q8NH02 315 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 ZNF563Q8TA94 476 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 EXTL1Q92935 676 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 SLC35B4Q969S0 331 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 PRRC1Q96M27 445 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 ZNF347Q96SE7 839 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 PIP5K1AQ99755 562 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 ZNF559Q9BR84 538 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 RNF32Q9H0A6 362 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 DSN1Q9H410 356 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 TMEM27Q9HBJ8 222 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 PROK2Q9HC23 129 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 EXOSC3Q9NQT5 275 aaKnown RBP9.52□□□□□ -0.89
TPM1-221ENST00000559831 RPS6KB2Q9UBS0 482 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 NKX1-2Q9UD57 310 aaPredicted RBP9.52□□□□□ -0.89
TPM1-221ENST00000559831 TESQ9UGI8 421 aaKnown RBP9.52□□□□□ -0.89
TPM1-221ENST00000559831 PTPRQQ9UMZ3 2332 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 MPDZO75970 2070 aa9.52□□□□□ -0.89
TPM1-221ENST00000559831 ANKUB1A6NFN9 424 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 SAC3D1A6NKF1 404 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 FAM47E-STBD1D6RA91 191 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 MKRN2OSH3BPM6 223 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 CDK2AP1O14519 115 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 SNPHO15079 494 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 CLOCKO15516 846 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 TPST2O60704 377 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 ADAM11O75078 769 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 DEAF1O75398 565 aaPredicted RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 E2F6O75461 281 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 LINGO3P0C6S8 592 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 PGCP20142 388 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 CNR1P21554 472 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 TCEA1P23193 301 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 RRM2P31350 389 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 IFNA8P32881 189 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 ACAA2P42765 397 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 SLC6A8P48029 635 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 IDH2P48735 452 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 P2RX1P51575 399 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 COPZ1P61923 177 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 PPP1R8Q12972 351 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 KCNAB2Q13303 367 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 PIN1Q13526 163 aaPredicted RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 OR1Q1Q15612 314 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 IQCCQ4KMZ1 466 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 ZNF766Q5HY98 468 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 SLC25A25Q6KCM7 469 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 TSPYL5Q86VY4 417 aaPredicted RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 ICA1LQ8NDH6 482 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 OR2M3Q8NG83 312 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 OR1J4Q8NGS1 313 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 OR52J3Q8NH60 311 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 OR5W2Q8NH69 310 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 HAS2Q92819 552 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 TMEM41AQ96HV5 264 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 ZNF597Q96LX8 424 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 SMAD5Q99717 465 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 KLHDC3Q9BQ90 382 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 FNDC11Q9BVV2 318 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 TRIM2Q9C040 744 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 REEP1Q9H902 201 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 RNPEPL1Q9HAU8 725 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 AGPAT4Q9NRZ5 378 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 TUBA8Q9NY65 449 aaPredicted RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 VNN3Q9NY84 501 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 SELENONQ9NZV5 590 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 STX18Q9P2W9 335 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 DNAJB9Q9UBS3 223 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 A4GNTQ9UNA3 340 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 SAMHD1Q9Y3Z3 626 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 PCDHGA9Q9Y5G4 932 aaKnown RBP9.51□□□□□ -0.89
TPM1-221ENST00000559831 CSAG2Q9Y5P2 127 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 U3KQV3 271 aa9.51□□□□□ -0.89
TPM1-221ENST00000559831 A0A1B0GWA3 101 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 TRAPPC13A5PLN9 417 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 PINLYPA6NC86 204 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 ANKRD33BA6NCL7 494 aa9.5□□□□□ -0.89
TPM1-221ENST00000559831 TNFRSF11BO00300 401 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms