RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ARSGQ96EG1 525 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 RSPO3Q9BXY4 272 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 EFCAB1Q9HAE3 211 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF337Q9Y3M9 751 aa18.36■□□□□ 0.53
TSPAN3-207ENST00000559494 C5orf58C9J3I9 102 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 DNAJA2O60884 412 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 DCTN3O75935 186 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 LINGO3P0C6S8 592 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 NID1P14543 1247 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 IL7RP16871 459 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 SLC6A2P23975 617 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 SCARB2Q14108 478 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 RAET1LQ5VY80 246 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 AAGABQ6PD74 315 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 CMIPQ8IY22 773 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 ZZZ3Q8IYH5 903 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 FAM26EQ8N5C1 309 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 TOR1AIP2Q8NFQ8 470 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 BBS10Q8TAM1 723 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 POC1BQ8TC44 478 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 WDR60Q8WVS4 1066 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 LRRC37BQ96QE4 947 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 SH3GL1Q99961 368 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 GPATCH1Q9BRR8 931 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 PRDM14Q9GZV8 571 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 PIF1Q9H611 641 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 ALKBH4Q9NXW9 302 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 MEMO1Q9Y316 297 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 CHST2Q9Y4C5 530 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 COL12A1Q99715 3063 aa18.35■□□□□ 0.53
TSPAN3-207ENST00000559494 ADAM11O75078 769 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 NUDT14O95848 222 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 ETS2P15036 469 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 CPN1P15169 458 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 PSMA4P25789 261 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 GCKP35557 465 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 LHX2P50458 406 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF41P51814 821 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 RBBP4Q09028 425 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 CYP51A1Q16850 503 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 RTL6Q6ICC9 239 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 NCCRP1Q6ZVX7 275 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 SERPINA11Q86U17 422 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 CALHM3Q86XJ0 350 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 ULK2Q8IYT8 1036 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 GTPBP8Q8N3Z3 284 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 RPRMLQ8N4K4 120 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 TMCO5AQ8N6Q1 288 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 DMRTA2Q96SC8 542 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 PIGQQ9BRB3 760 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 TP63Q9H3D4 680 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 ARL8BQ9NVJ2 186 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 RLIMQ9NVW2 624 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF232Q9UNY5 417 aa18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF443Q9Y2A4 671 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 PHF3Q92576 2039 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-207ENST00000559494 C7orf72A4D263 438 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 E9PLN8 166 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 AGFG2O95081 481 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 THBS1P07996 1170 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 ACVR2AP27037 513 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 CCR4P51679 360 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 EEF1A1P68104 462 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 MRPL2Q5T653 305 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 FAM91A1Q658Y4 838 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 C8orf82Q6P1X6 216 aaPredicted RBP18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 ENPP6Q6UWR7 440 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF836Q6ZNA1 936 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 CLIP4Q8N3C7 705 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 C11orf65Q8NCR3 313 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 CCDC197Q8NCU1 140 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 HIPK4Q8NE63 616 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 ZBTB8AQ96BR9 441 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 ZNF583Q96ND8 569 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 ECSITQ9BQ95 431 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 VKORC1Q9BQB6 163 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 EXOSC3Q9NQT5 275 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 CMTM6Q9NX76 183 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 DNAJB12Q9NXW2 375 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 USP22Q9UPT9 525 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 CAMK2AQ9UQM7 478 aa18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 GPC6Q9Y625 555 aaPredicted RBP18.33■□□□□ 0.53
TSPAN3-207ENST00000559494 DOPEY2Q9Y3R5 2298 aa18.33■□□□□ 0.52
TSPAN3-207ENST00000559494 CDHR4A6H8M9 788 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 WIPF3A6NGB9 483 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 AHRRA9YTQ3 701 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 FAM47E-STBD1D6RA91 191 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 LINC01387J3KSC0 135 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 EFNA2O43921 213 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 WDR1O75083 606 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 GCM2O75603 506 aaPredicted RBP18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 LDLRP01130 860 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 PABPC4LP0CB38 370 aaKnown RBP18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 RNF224P0DH78 156 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 ESRRAP11474 423 aaPredicted RBP18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 CLDN18P56856 261 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 SRYQ05066 204 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 ART3Q13508 389 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 CBFBQ13951 182 aa18.32■□□□□ 0.52
TSPAN3-207ENST00000559494 LARS2Q15031 903 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms