RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 LCN1P31025 176 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 SOAT1P35610 550 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 SERPINB4P48594 390 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 MAPK14Q16539 360 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 PDZK1Q5T2W1 519 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 TFAP2EQ6VUC0 442 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 ESPNLQ6ZVH7 1005 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.07□□□□□ -0.48
VPS18-203ENST00000558855 HMGN2P46Q86SG4 172 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 WFDC8Q8IUA0 241 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 CNPY4Q8N129 248 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 ATP6V1C2Q8NEY4 427 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 LILRB1Q8NHL6 650 aaPredicted RBP12.07□□□□□ -0.48
VPS18-203ENST00000558855 RFWD2Q8NHY2 731 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 RAB3IL1Q8TBN0 382 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 SFXN5Q8TD22 340 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 TUBGCP3Q96CW5 907 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 Q96MF0 132 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 SDF2Q99470 211 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 SLC39A3Q9BRY0 314 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 DUSP26Q9BV47 211 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 QRSL1Q9H0R6 528 aaKnown RBP12.07□□□□□ -0.48
VPS18-203ENST00000558855 ZNF226Q9NYT6 803 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 EMC9Q9Y3B6 208 aa12.07□□□□□ -0.48
VPS18-203ENST00000558855 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 PRAMEF27A3QJZ7 478 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 H7C1Q1 480 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ZNF195O14628 629 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 SYNGR4O95473 234 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 LY6G6DO95868 133 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 PLGP00747 810 aaPredicted RBP12.06□□□□□ -0.48
VPS18-203ENST00000558855 TUBBP07437 444 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ENPP1P22413 925 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 MAPK1P28482 360 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 P2RX1P51575 399 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ATP12AP54707 1039 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 CTBP2P56545 445 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 C21orf58P58505 322 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 PGS1Q32NB8 556 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 SPDYE7PQ495Y7 208 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
VPS18-203ENST00000558855 ANKRD46Q86W74 232 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 TUSC5Q8IXB3 177 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 GABRG1Q8N1C3 465 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ZNF619Q8N2I2 560 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ZNF614Q8N883 585 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 OR56A1Q8NGH5 318 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ADAMTS15Q8TE58 950 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.06□□□□□ -0.48
VPS18-203ENST00000558855 NEUROG1Q92886 237 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 CAVIN3Q969G5 261 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 COX4I2Q96KJ9 171 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 CCL19Q99731 98 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 PIP5K1AQ99755 562 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 TMEM204Q9BSN7 226 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ACTR6Q9GZN1 396 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 EML4Q9HC35 981 aaKnown RBP12.06□□□□□ -0.48
VPS18-203ENST00000558855 MCTS1Q9ULC4 181 aaKnown RBP12.06□□□□□ -0.48
VPS18-203ENST00000558855 EDARQ9UNE0 448 aa12.06□□□□□ -0.48
VPS18-203ENST00000558855 ZNF814B7Z6K7 855 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 C9JVG2 144 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 ANKRD28O15084 1053 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 CFLARO15519 480 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 SMPD2O60906 423 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 ADAM11O75078 769 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 NUDT14O95848 222 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 HPGDP15428 266 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 ELK4P28324 431 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 CLDN8P56748 225 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 CARD18P57730 90 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 IFFO1Q0D2I5 559 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 SKP2Q13309 424 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 CAPRIN1Q14444 709 aaKnown RBP12.05□□□□□ -0.48
VPS18-203ENST00000558855 FGFBP1Q14512 234 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 QPRTQ15274 297 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 CHI3L2Q15782 390 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 TMEM176BQ3YBM2 270 aaPredicted RBP12.05□□□□□ -0.48
VPS18-203ENST00000558855 SLC25A53Q5H9E4 307 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 SHEQ5VZ18 495 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 YTHDF3Q7Z739 585 aaKnown RBP12.05□□□□□ -0.48
VPS18-203ENST00000558855 BIVMQ86UB2 503 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 MISPQ8IVT2 679 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 S100PBPQ96BU1 408 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 TRIM44Q96DX7 344 aaPredicted RBP12.05□□□□□ -0.48
VPS18-203ENST00000558855 DNAJA3Q96EY1 480 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 ZNF300Q96RE9 604 aaPredicted RBP12.05□□□□□ -0.48
VPS18-203ENST00000558855 TMEM109Q9BVC6 243 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 BHLHE41Q9C0J9 482 aaPredicted RBP12.05□□□□□ -0.48
VPS18-203ENST00000558855 AKTIPQ9H8T0 292 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 ASIC5Q9NY37 505 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 DTNAQ9Y4J8 743 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 ACTL7BQ9Y614 415 aa12.05□□□□□ -0.48
VPS18-203ENST00000558855 RNF103-CHMP3A0A140T963 221 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 CLDN24A6NM45 220 aa12.04□□□□□ -0.48
VPS18-203ENST00000558855 ETV2O00321 342 aaPredicted RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 SMAD7O15105 426 aaKnown RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 SMAD9O15198 467 aaKnown RBP12.04□□□□□ -0.48
VPS18-203ENST00000558855 UGT2B17O75795 530 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms