RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 IDSP22304 550 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 CD80P33681 288 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 GRIA1P42261 906 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 TDO2P48775 406 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 CSRP3P50461 194 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 HNRNPA3P51991 378 aaKnown RBP3.4□□□□□ -1.87
CASC4-206ENST00000558847 PAX2Q02962 417 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 FGL1Q08830 312 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 SLC5A12Q1EHB4 618 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 EIPR1Q53HC9 387 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 LIPNQ5VXI9 398 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 SLC22A10Q63ZE4 541 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 TPRA1Q86W33 373 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 ZNF679Q8IYX0 411 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 CLEC4FQ8N1N0 589 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 RHOXF1Q8NHV9 184 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 ADAMTS16Q8TE57 1224 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 SLC41A3Q96GZ6 507 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 COQ2Q96H96 371 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 SIGLEC12Q96PQ1 595 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 CCT8L2Q96SF2 557 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 SLC35A5Q9BS91 424 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 NAT10Q9H0A0 1025 aaKnown RBP3.4□□□□□ -1.87
CASC4-206ENST00000558847 CA5BQ9Y2D0 317 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 FLVCR1Q9Y5Y0 555 aa3.4□□□□□ -1.87
CASC4-206ENST00000558847 TDRD15B5MCY1 1934 aaKnown RBP3.4□□□□□ -1.87
CASC4-206ENST00000558847 PNPLA6Q8IY17 1366 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 POGZQ7Z3K3 1410 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 FAM240BA0A1B0GVZ2 78 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 DHRS7CA6NNS2 312 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 PP2D1A8MPX8 630 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 E7ESA3 106 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 TAPBPO15533 448 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 ZNF354AO60765 605 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 SNNO75324 88 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 PGK1P00558 417 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 STSP08842 583 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 RPS2P15880 293 aaKnown RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 ASAH1Q13510 395 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 DPYSL3Q14195 570 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 MXD4Q14582 209 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 DPYSL2Q16555 572 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 LPAL2Q16609 132 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 PAGE2BQ5JRK9 111 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 C10orf120Q5SQS8 335 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 ATAD3CQ5T2N8 411 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 MARC1Q5VT66 337 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 UBQLNLQ8IYU4 475 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 LYG1Q8N1E2 194 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 EIF1ADQ8N9N8 165 aaKnown RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 OR4D5Q8NGN0 318 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 TCTEX1D2Q8WW35 142 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 FOXN4Q96NZ1 517 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 RPRD1AQ96P16 312 aaPredicted RBP3.39□□□□□ -1.87
CASC4-206ENST00000558847 NIPSNAP3BQ9BS92 247 aa3.39□□□□□ -1.87
CASC4-206ENST00000558847 TRAV26-1A0A087WT03 109 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 SMIM28A0A1B0GU29 152 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 METTL21EPA6NDL7 271 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 F5H6K3 240 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 G3V4G9 280 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 H3BMQ9 156 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 ZNF208O43345 1280 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 BCL2L11O43521 198 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 EFNA2O43921 213 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 NOL4O94818 638 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 PTBP1P26599 531 aaKnown RBP eCLIP3.38□□□□□ -1.876e-7■■■■■ 27.6
CASC4-206ENST00000558847 PRKAR2BP31323 418 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 RPL29P47914 159 aaKnown RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 PLK1P53350 603 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 MRPS11P82912 194 aaKnown RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 CHRNB3Q05901 458 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 KLRC3Q07444 240 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 SLC10A7Q0GE19 358 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 LRRC74AQ0VAA2 488 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 ZMYND11Q15326 602 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 GGTA1PQ4G0N0 100 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 FAM120AOSQ5T036 256 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 UFSP1Q6NVU6 142 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 KCNIP4Q6PIL6 250 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 DNM1P46Q6ZS02 220 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 EFL1Q7Z2Z2 1120 aaKnown RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 MYPOPQ86VE0 399 aaPredicted RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 CDC20BQ86Y33 519 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 CNPY4Q8N129 248 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 BHLHE23Q8NDY6 225 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 OR2T33Q8NG76 320 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 OR1F12Q8NHA8 337 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 MAIP1Q8WWC4 291 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 PIGCQ92535 297 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 RPL3LQ92901 407 aaKnown RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 EFHD2Q96C19 240 aaPredicted RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 RBM14Q96PK6 669 aaKnown RBP3.38□□□□□ -1.87
CASC4-206ENST00000558847 PSKH2Q96QS6 385 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 TMEM43Q9BTV4 400 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 EDEM2Q9BV94 578 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 TSSK1BQ9BXA7 367 aa3.38□□□□□ -1.87
CASC4-206ENST00000558847 CAPS2Q9BXY5 557 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms