RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CSTAP01040 98 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 BCHEP06276 602 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 SNRPB2P08579 225 aaKnown RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LINGO3P0C6S8 592 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 UBL4AP11441 157 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 PEPDP12955 493 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 PSMA4P25789 261 aaKnown RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 PGM1P36871 562 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 ZNF41P51814 821 aaPredicted RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 FOXF1Q12946 379 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 ART3Q13508 389 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 SELPLGQ14242 412 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 FGFBP1Q14512 234 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 GLYR1Q49A26 553 aaPredicted RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 METTL21CQ5VZV1 264 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 NSUN5P2Q63ZY6 315 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LRRC74BQ6ZQY2 392 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 VRK2Q86Y07 508 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 ATP6V1C2Q8NEY4 427 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LILRB4Q8NHJ6 448 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 ZPLD1Q8TCW7 415 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 C10orf82Q8WW14 230 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 CNOT9Q92600 299 aaKnown RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 TMEM19Q96HH6 336 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 ZNF845Q96IR2 970 aaPredicted RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LAT2Q9GZY6 243 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LEF1Q9UJU2 399 aaPredicted RBP12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LIPT1Q9Y234 373 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 ARHGAP21Q5T5U3 1957 aa12.47□□□□□ -0.41
TSPAN3-205ENST00000558745 LOC100653049A0A140TA62 436 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 FBP2O00757 339 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 EIF4E2O60573 245 aaKnown RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 ADAM11O75078 769 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 KRT34O76011 436 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 HOXD4P09016 255 aaPredicted RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 AGAP20933 346 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 SHC1P29353 583 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 CEACAM8P31997 349 aaPredicted RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 RYKP34925 604 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 PTGER4P35408 488 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 KCNJ10P78508 379 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 HPCAP84074 193 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 FOXF2Q12947 444 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 KLF10Q13118 480 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 SKP2Q13309 424 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 QPRTQ15274 297 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 RUNDC3AQ59EK9 446 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 RIPPLY2Q5TAB7 128 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 AP1ARQ63HQ0 302 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 POMZP3Q6PJE2 187 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 EIF3MQ7L2H7 374 aaKnown RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 ADGRE4PQ86SQ3 457 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 FIG4Q92562 907 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 ELAC2Q9BQ52 826 aaKnown RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 RSPO3Q9BXY4 272 aaPredicted RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 MTHFD2LQ9H903 347 aaPredicted RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 POLE3Q9NRF9 147 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 TMEM45AQ9NWC5 275 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 ARMCX1Q9P291 453 aa12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.46□□□□□ -0.41
TSPAN3-205ENST00000558745 CACNA1CQ13936 2221 aa12.46□□□□□ -0.42
TSPAN3-205ENST00000558745 A0A087WZY1 265 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 AGAP5A6NIR3 686 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 CD8B2A6NJW9 211 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 FAM47E-STBD1D6RA91 191 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 EIF1AYO14602 144 aaKnown RBP12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 ANGPT2O15123 496 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 GUSBP08236 651 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 PRKCAP17252 672 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 CHRNB4P30926 498 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 ZNF136P52737 540 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 IRX1P78414 480 aaPredicted RBP12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 CAPRIN1Q14444 709 aaKnown RBP12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 BCL2A1Q16548 175 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 DHDDSQ86SQ9 333 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 GGNQ86UU5 652 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 LACC1Q8IV20 430 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 MEIOBQ8N635 442 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 TOR1AIP2Q8NFQ8 470 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 OR5W2Q8NH69 310 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 ZBTB8AQ96BR9 441 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 DTNBP1Q96EV8 351 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 PINK1Q9BXM7 581 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 FAM107BQ9H098 131 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 CALHM2Q9HA72 323 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 RLIMQ9NVW2 624 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 P2RX2Q9UBL9 471 aa12.45□□□□□ -0.42
TSPAN3-205ENST00000558745 A0A0J9YW62 118 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 MBD3L4A6NDZ8 208 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 MBD3L3A6NE82 208 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 MBD3L5A6NJ08 208 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 AP3D1O14617 1153 aa12.44□□□□□ -0.42
TSPAN3-205ENST00000558745 IL2RAP01589 272 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms