RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 OR8J3Q8NGG0 315 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 OR5W2Q8NH69 310 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 GPR119Q8TDV5 335 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 OIT3Q8WWZ8 545 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 EFCAB1Q9HAE3 211 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 BCL2L10Q9HD36 194 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 ARL8BQ9NVJ2 186 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 RLIMQ9NVW2 624 aa12.98□□□□□ -0.33
USP3-205ENST00000557884 ZNF443Q9Y2A4 671 aaPredicted RBP12.98□□□□□ -0.33
USP3-205ENST00000557884 LRRK2Q5S007 2527 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 CCT8L1PA6NM43 557 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 FIGNL2A6NMB9 653 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 H3BML4 177 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ACTL6AO96019 429 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ESRRAP11474 423 aaPredicted RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 POU3F2P20265 443 aaPredicted RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 PRDX6P30041 224 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 LHX2P50458 406 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 GZMMP51124 257 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 SUMO3P55854 103 aaPredicted RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 FOXF1Q12946 379 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 CBFBQ13951 182 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 QPRTQ15274 297 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 PRAMEF8Q5VWM4 474 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 PRAMEF7Q5VXH5 474 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 NET1Q7Z628 596 aaPredicted RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 ULK2Q8IYT8 1036 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 FAM26EQ8N5C1 309 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ANKS4BQ8N8V4 417 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 HIPK4Q8NE63 616 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 FAM71CQ8NEG0 241 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 TOR1AIP2Q8NFQ8 470 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 RELTQ969Z4 430 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ZNF524Q96C55 264 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 WDYHV1Q96HA8 205 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 RNF145Q96MT1 663 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 SH3GL1Q99961 368 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 TP63Q9H3D4 680 aaPredicted RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 DNAJB12Q9NXW2 375 aaKnown RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 GMPR2Q9P2T1 348 aaKnown RBP12.97□□□□□ -0.33
USP3-205ENST00000557884 USP22Q9UPT9 525 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ANGPT4Q9Y264 503 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ZNF337Q9Y3M9 751 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ESPL1Q14674 2120 aa12.97□□□□□ -0.33
USP3-205ENST00000557884 ZNF407Q9C0G0 2248 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 NCKAP5O14513 1909 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 H0YC42 278 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 AP3D1O14617 1153 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 SEC14L5O43304 696 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 OPN1LWP04000 364 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 LINGO3P0C6S8 592 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 GKN3PP0CG01 181 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 RNF224P0DH78 156 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 CHMP24386 653 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 ACVR2AP27037 513 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 TPD52P55327 224 aaPredicted RBP12.96□□□□□ -0.33
USP3-205ENST00000557884 EEF1A1P68104 462 aaKnown RBP12.96□□□□□ -0.33
USP3-205ENST00000557884 LARS2Q15031 903 aaKnown RBP12.96□□□□□ -0.33
USP3-205ENST00000557884 TMEM44Q2T9K0 475 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 GLYR1Q49A26 553 aaPredicted RBP12.96□□□□□ -0.33
USP3-205ENST00000557884 ZNF311Q5JNZ3 666 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 ENPP6Q6UWR7 440 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 SERPINA11Q86U17 422 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 CALHM3Q86XJ0 350 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 KRT73Q86Y46 540 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 CMIPQ8IY22 773 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 UBQLNLQ8IYU4 475 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 CLIP4Q8N3C7 705 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 GTPBP8Q8N3Z3 284 aaPredicted RBP12.96□□□□□ -0.33
USP3-205ENST00000557884 METTL25Q8N6Q8 603 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 FBXO27Q8NI29 283 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 PMM1Q92871 262 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 GPATCH1Q9BRR8 931 aaKnown RBP12.96□□□□□ -0.33
USP3-205ENST00000557884 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 CMTM6Q9NX76 183 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 ZNF232Q9UNY5 417 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 MEMO1Q9Y316 297 aa12.96□□□□□ -0.33
USP3-205ENST00000557884 CDHR4A6H8M9 788 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 KDM4EB2RXH2 506 aaPredicted RBP12.95□□□□□ -0.34
USP3-205ENST00000557884 H0Y3Z8 333 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 FRS3O43559 492 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 ADAM11O75078 769 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 THBS1P07996 1170 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 PABPC4LP0CB38 370 aaKnown RBP12.95□□□□□ -0.34
USP3-205ENST00000557884 PEPDP12955 493 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 ETS2P15036 469 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 ZNF17P17021 662 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 PGCP20142 388 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 PCGF2P35227 344 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 SLC7A2P52569 658 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 CLDN18P56856 261 aa12.95□□□□□ -0.34
USP3-205ENST00000557884 CLDN20P56880 219 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms