RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CBLCQ9ULV8 474 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 MGAT4BQ9UQ53 548 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 RNF6Q9Y252 685 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 HSPE1-MOB4S4R3N1 261 aa6.79□□□□□ -1.32
SPG11-204ENST00000557866 TP53BP1Q12888 1972 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 UNC13CQ8NB66 2214 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 TTC28Q96AY4 2481 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 A0A087WXM4 84 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ZAR1LA6NP61 321 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 M0R129 80 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 SLC1A7O00341 560 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 AP3D1O14617 1153 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 FLRT2O43155 660 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CBFA2T3O75081 653 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 OR6B1O95007 311 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 IL33O95760 270 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 GP1BAP07359 652 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 HTR1AP08908 422 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 OSMP13725 252 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 DRD5P21918 477 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 GSTT1P30711 240 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CSTF2P33240 577 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPG11-204ENST00000557866 ACAA2P42765 397 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 PPICP45877 212 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 OMPP47874 163 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 RPS6KA3P51812 740 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CRISP1P54107 249 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ATP12AP54707 1039 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 UGT2B15P54855 530 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 NR1H2P55055 460 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 TPD52P55327 224 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 DCDP81605 110 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 MC2RQ01718 297 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 PIGFQ07326 219 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 TARDBPQ13148 414 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPG11-204ENST00000557866 ILKQ13418 452 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 FGFBP1Q14512 234 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 EBPQ15125 230 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 OR1Q1Q15612 314 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 SMN1Q16637 294 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 NDUFAF6Q330K2 333 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 KLHL26Q53HC5 615 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 EIPR1Q53HC9 387 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 FNDC7Q5VTL7 733 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 FAM69BQ5VUD6 431 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 FAAH2Q6GMR7 532 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 C1orf94Q6P1W5 598 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ZNF773Q6PK81 442 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CD300LDQ6UXZ3 194 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 WDR88Q6ZMY6 472 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 PLEKHM3Q6ZWE6 761 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ANKRD37Q7Z713 158 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 SLCO6A1Q86UG4 719 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 PPP1R3BQ86XI6 285 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 KIF18BQ86Y91 864 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CCDC103Q8IW40 242 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 C9orf40Q8IXQ3 194 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ENTHD1Q8IYW4 607 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ZNF441Q8N8Z8 693 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 SETD9Q8NE22 299 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 NFAM1Q8NET5 270 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 OR4K5Q8NGD3 323 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 OR1N1Q8NGS0 311 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 OR4C3Q8NH37 302 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 OR14A16Q8NHC5 309 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 RHOXF1Q8NHV9 184 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 NR4A3Q92570 626 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 DAZLQ92904 295 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 ZNF566Q969W8 418 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 EFHD2Q96C19 240 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 WDR77Q9BQA1 342 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 SLC7A5P2Q9GIP4 190 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 RBM38Q9H0Z9 239 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 TRIM45Q9H8W5 580 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 ZNF556Q9HAH1 456 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CACYBPQ9HB71 228 aaKnown RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 Q9N2J8 555 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 PAK1IP1Q9NWT1 392 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 TUBA8Q9NY65 449 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 ZNF223Q9UK11 482 aaPredicted RBP6.78□□□□□ -1.32
SPG11-204ENST00000557866 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 CLCA3PQ9Y6N3 262 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 NCOR1O75376 2440 aa6.78□□□□□ -1.32
SPG11-204ENST00000557866 TRAPPC13A5PLN9 417 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 FRG2CA6NGY1 282 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 SERINC4A6NH21 518 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 IDSB3KWA1 339 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 POLR1CO15160 346 aaPredicted RBP6.77□□□□□ -1.33
SPG11-204ENST00000557866 TO15178 435 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 KLF4O43474 513 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 XPNPEP2O43895 674 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 PIP5K1CO60331 668 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 FMO6PO60774 539 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ALOX12BO75342 701 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 SOX14O95416 240 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 ANGPTL1O95841 491 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 HEXBP07686 556 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 CCDC159P0C7I6 412 aa6.77□□□□□ -1.33
SPG11-204ENST00000557866 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms