RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 STAMBPO95630 424 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 ACTL6AO96019 429 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 GGT1P19440 569 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 CHMP24386 653 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 ELK4P28324 431 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 HTR3AP46098 478 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 KCNJ5P48544 419 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 RBPJQ06330 500 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 C19orf57Q0VDD7 668 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 SLC25A53Q5H9E4 307 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 RPS26P11Q5JNZ5 115 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 AAGABQ6PD74 315 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 ZNF836Q6ZNA1 936 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 FBXO27Q8NI29 283 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 SLC7A6OSQ96CW6 309 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 MRGPRX4Q96LA9 322 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 PIGQQ9BRB3 760 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 RTN4RQ9BZR6 473 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 POLR2J2Q9GZM3 115 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 QRSL1Q9H0R6 528 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 POLR2J3Q9H1A7 115 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 DNAJB12Q9NXW2 375 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 RPS6KA6Q9UK32 745 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 SLC9A8Q9Y2E8 581 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 CARD8Q9Y2G2 431 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 KALRNO60229 2985 aa12.83□□□□□ -0.36
SUPT16H-208ENST00000557652 MED12Q93074 2177 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 CFAP73A6NFT4 308 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 AQP7O14520 342 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 FMO6PO60774 539 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 DNAJC8O75937 253 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 LINGO3P0C6S8 592 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 UBTFL6P0CB48 400 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 ME2P23368 584 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 MAGEA5P43359 124 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 TDGF1P3P51864 188 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 COPZ1P61923 177 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 PMP22Q01453 160 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 SF3B4Q15427 424 aaKnown RBP eCLIP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 RNFT1Q5M7Z0 435 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 RINLQ6ZS11 566 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 TRILQ7L0X0 811 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 VRK2Q86Y07 508 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 FAM83FQ8NEG4 500 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 NEIL3Q8TAT5 605 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 GPR119Q8TDV5 335 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 PROX1Q92786 737 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 SARAFQ96BY9 339 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 PIF1Q9H611 641 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 ASF1BQ9NVP2 202 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 TAS2R10Q9NYW0 307 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 MED11Q9P086 117 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 ACTR3BQ9P1U1 418 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 TESQ9UGI8 421 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 FBXL2Q9UKC9 423 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 SNX13Q9Y5W8 968 aa12.82□□□□□ -0.36
SUPT16H-208ENST00000557652 PHF3Q92576 2039 aaKnown RBP12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 CFAP46Q8IYW2 2715 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 CENPVL1A0A0U1RR11 272 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 FAM166BA8MTA8 275 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 NPIPA5E9PKD4 350 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 BCKDKO14874 412 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 GCM2O75603 506 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 NUDT14O95848 222 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 LGI1O95970 557 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 RFPL3SP0C7P2 107 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 HK1P19367 917 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 AQP1P29972 269 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 SELENOWP63302 87 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 DMTNQ08495 405 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 EPS8Q12929 822 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 TRAP1Q12931 704 aaKnown RBP12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 TRIM25Q14258 630 aaKnown RBP12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 BCL2A1Q16548 175 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 TMEM44Q2T9K0 475 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 PLPPR5Q32ZL2 321 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 GLYATQ6IB77 296 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 CBLN3Q6UW01 205 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 ENPP6Q6UWR7 440 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 RANBP3LQ86VV4 465 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 GATSQ8NAP1 163 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 GALNT11Q8NCW6 608 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 OR14L1PQ8NHC6 308 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 FIG4Q92562 907 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 TAMM41Q96BW9 452 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 ASB9Q96DX5 294 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 LRMDAQ9H2I8 198 aa12.81□□□□□ -0.36
SUPT16H-208ENST00000557652 LDAHQ9H6V9 325 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms