RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 MTERF1Q99551 399 aaKnown RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 DOK1Q99704 481 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 KLHDC3Q9BQ90 382 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 SLC17A5Q9NRA2 495 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF275Q9NSD4 429 aaPredicted RBP8.09□□□□□ -1.11
NEDD1-211ENST00000557454 MED17Q9NVC6 651 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 PLEK2Q9NYT0 353 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 NUP50Q9UKX7 468 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 AMDHD2Q9Y303 409 aa8.09□□□□□ -1.11
NEDD1-211ENST00000557454 IGHV1-18A0A0C4DH31 117 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 C7orf72A4D263 438 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 C5orf63A6NC05 138 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 SMTNL1A8MU46 457 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 AKR1B15C9JRZ8 316 aaPredicted RBP8.08□□□□□ -1.12
NEDD1-211ENST00000557454 DEAF1O75398 565 aaPredicted RBP8.08□□□□□ -1.12
NEDD1-211ENST00000557454 SLITRK5O94991 958 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 TTC4O95801 387 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 ANGPTL1O95841 491 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 GPANK1O95872 356 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 HPXP02790 462 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 OPN1MWP04001 364 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 CSF1P09603 554 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 OPN1MW2P0DN77 364 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 OPN1MW3P0DN78 364 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF37AP17032 561 aaPredicted RBP8.08□□□□□ -1.12
NEDD1-211ENST00000557454 ACHEP22303 614 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 GPC1P35052 558 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 PSPHP78330 225 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 KLF17Q5JT82 389 aaPredicted RBP8.08□□□□□ -1.12
NEDD1-211ENST00000557454 APOOLQ6UXV4 268 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 LRRC70Q7Z2Q7 622 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 GALNT5Q7Z7M9 940 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 ADAMTSL2Q86TH1 951 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 TRABD2AQ86V40 505 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 NUDT13Q86X67 352 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 SGCDQ92629 289 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 YIPF5Q969M3 257 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 KCNS3Q9BQ31 491 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 TBL1XR1Q9BZK7 514 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 ASB6Q9NWX5 421 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 C1RLQ9NZP8 487 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 UTS2RQ9UKP6 389 aa8.08□□□□□ -1.12
NEDD1-211ENST00000557454 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.08□□□□□ -1.12
NEDD1-211ENST00000557454 DNAH7Q8WXX0 4024 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 TMEM129A0AVI4 362 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF724A8MTY0 619 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 STK16O75716 305 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 NDUFA7O95182 113 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 PPP1R3DO95685 299 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 MPIG6BO95866 241 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 AHSGP02765 367 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 MAGEA1P43355 309 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 RFX3P48380 749 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 VPS41P49754 854 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 CLK3P49761 638 aaKnown RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF41P51814 821 aaPredicted RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 ARFIP1P53367 373 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 UBASH3AP57075 661 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 C17orf67Q0P5P2 114 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 FOXF1Q12946 379 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 E2F2Q14209 437 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 ZNF460Q14592 562 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 TGFBIQ15582 683 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 TMEM176BQ3YBM2 270 aaPredicted RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 ARMC3Q5W041 872 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 SLC48A1Q6P1K1 146 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 GALNT18Q6P9A2 607 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 RAD9BQ6WBX8 426 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 JAZF1Q86VZ6 243 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 NKAPQ8N5F7 415 aaKnown RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 OR52E4Q8NGH9 312 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 FBXO30Q8TB52 745 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 CKAP2Q8WWK9 683 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 JADE3Q92613 823 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 APH1AQ96BI3 265 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 NAT10Q9H0A0 1025 aaKnown RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 CNOT10Q9H9A5 744 aaKnown RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 ASH2LQ9UBL3 628 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 MALT1Q9UDY8 824 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 CES1P1Q9UKY3 287 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 PACSIN2Q9UNF0 486 aaPredicted RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
NEDD1-211ENST00000557454 SOX21Q9Y651 276 aaPredicted RBP8.07□□□□□ -1.12
NEDD1-211ENST00000557454 PLXNB1O43157 2135 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 PIP5K1CO60331 668 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 CCNT2O60583 730 aaKnown RBP8.06□□□□□ -1.12
NEDD1-211ENST00000557454 CYTIPO60759 359 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 CRYAAP02489 173 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 CRYBA1P05813 215 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 CSNK2A2P19784 350 aaPredicted RBP8.06□□□□□ -1.12
NEDD1-211ENST00000557454 TCN1P20061 433 aaPredicted RBP8.06□□□□□ -1.12
NEDD1-211ENST00000557454 NPR2P20594 1047 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 GATA3P23771 443 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 THBS4P35443 961 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 PIK3CBP42338 1070 aa8.06□□□□□ -1.12
NEDD1-211ENST00000557454 TMEM33P57088 247 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms