RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PGAP3Q96FM1 320 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 SENP5Q96HI0 755 aaPredicted RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 RBM41Q96IZ5 413 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 SEPHS2Q99611 448 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 UTP23Q9BRU9 249 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 CNPY3Q9BT09 278 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 C19orf24Q9BVV8 132 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 PLA2G12AQ9BZM1 189 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 DEFB127Q9H1M4 99 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 GHITMQ9H3K2 345 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 DHX35Q9H5Z1 703 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 XKR8Q9H6D3 395 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 EXO5Q9H790 373 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 SYTL2Q9HCH5 934 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 C3orf18Q9UK00 162 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 ZNF835Q9Y2P0 537 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 COQ4Q9Y3A0 265 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 L3MBTL1Q9Y468 752 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 ALG6Q9Y672 507 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 FLNAP21333 2647 aaKnown RBP3.29□□□□□ -1.88
CHD8-212ENST00000557329 HIVEP2P31629 2446 aa3.29□□□□□ -1.88
CHD8-212ENST00000557329 ATRQ13535 2644 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 DOCK10Q96BY6 2186 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GTF3C1Q12789 2109 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 HCFC1P51610 2035 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 CHD3Q12873 2000 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 CXorf51AA0A1B0GTR3 108 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 HYKKA2RU49 373 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GTPBP10A4D1E9 387 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 SYNDIG1LA6NDD5 238 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TUBAL3A6NHL2 446 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GLOD5A6NK44 160 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 C2orf74A8MZ97 194 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 CASKO14936 926 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 HPP00738 406 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 CD48P09326 243 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 SLC35G4P0C7Q5 338 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 FRMD6-AS1P0C7T7 363 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 PIRTP0C851 137 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TEAD1P28347 426 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 ZFP36L2P47974 494 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 SPINT3P49223 89 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 EFNA3P52797 238 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 STC1P52823 247 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 EMP2P54851 167 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GCNT1Q02742 428 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 CACNG1Q06432 222 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 ENPEPQ07075 957 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 KLC1Q07866 573 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 IL10RBQ08334 325 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 PNRC1Q12796 327 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 NFE2L1Q14494 772 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 RFTN1Q14699 578 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 OR1C1Q15619 314 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TCTE1Q5JU00 501 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 MARC1Q5VT66 337 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 RHBDD2Q6NTF9 364 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TMEM220Q6QAJ8 160 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 UNC5DQ6UXZ4 953 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 C12orf54Q6X4T0 127 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 Q6ZPB1 254 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 CFAP206Q8IYR0 622 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 LYG1Q8N1E2 194 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 C2orf73Q8N5S3 287 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 ZNF614Q8N883 585 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TMEM178AQ8NBL3 297 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 OR10S1Q8NGN2 331 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 NAT14Q8WUY8 206 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 SLCO2A1Q92959 643 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GLYATL1Q969I3 302 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 SLC35C1Q96A29 364 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 POM121L2Q96KW2 1035 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 SIGLEC12Q96PQ1 595 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 CCL19Q99731 98 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 NRTNQ99748 197 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TIMM29Q9BSF4 260 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 TRAF4Q9BUZ4 470 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 FNDC11Q9BVV2 318 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 BEX2Q9BXY8 128 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 EGLN1Q9GZT9 426 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 PPIL3Q9H2H8 161 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 KCNK13Q9HB14 408 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 MRM3Q9HC36 420 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 FAM60AQ9NP50 221 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 PPANQ9NQ55 473 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 ZNF701Q9NV72 531 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 MRPL15Q9P015 296 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 STOX2Q9P2F5 926 aaPredicted RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 CTSFQ9UBX1 484 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 PCSK1NQ9UHG2 260 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 GNPTGQ9UJJ9 305 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 PPIEQ9UNP9 301 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 EXOGQ9Y2C4 368 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 TDRKHQ9Y2W6 561 aaKnown RBP3.28□□□□□ -1.88
CHD8-212ENST00000557329 DOCK4Q8N1I0 1966 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 CUBNO60494 3623 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 STAB1Q9NY15 2570 aa3.28□□□□□ -1.88
CHD8-212ENST00000557329 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
CHD8-212ENST00000557329 A0A0J9YYE9 177 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms