RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TIGARQ9NQ88 270 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 ADAM21Q9UKJ8 722 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 PYCARDQ9ULZ3 195 aa7.73□□□□□ -1.17
VRK1-206ENST00000557222 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 A0A1W2PQD3 144 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 C17orf51A8MQB3 221 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 NPIPB8E9PQR5 432 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 POC1B-GALNT4F8VUJ3 575 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 H3BS24 57 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 TBX19O60806 448 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 RSL1D1O76021 490 aaKnown RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 NKX2-2O95096 273 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 IFNA2P01563 188 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 DANCRP0C864 163 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 PRPS2P11908 318 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 ME2P23368 584 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 PSMA4P25789 261 aaKnown RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 GABRA3P34903 492 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 HTR6P50406 440 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 KRTAP1-1Q07627 177 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 DMTNQ08495 405 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 SLC29A2Q14542 456 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 RNPS1Q15287 305 aaKnown RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 CLEC12BQ2HXU8 276 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 PLPPR5Q32ZL2 321 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 GRAMD1BQ3KR37 738 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 GLE1Q53GS7 698 aaKnown RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 SPDYAQ5MJ70 313 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 TEX35Q5T0J7 233 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 ZCCHC12Q6PEW1 402 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 PODNL1Q6PEZ8 512 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 APOOLQ6UXV4 268 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 GALNT10Q86SR1 603 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 CDRT4Q8N9R6 151 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 OR6Y1Q8NGX8 325 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 ROBO4Q8WZ75 1007 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 AKAP1Q92667 903 aaKnown RBP eCLIP7.72□□□□□ -1.17
VRK1-206ENST00000557222 FMO2Q99518 471 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 ESRP2Q9H6T0 727 aaKnown RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 L2HGDHQ9H9P8 463 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 RRAGDQ9NQL2 400 aaPredicted RBP7.72□□□□□ -1.17
VRK1-206ENST00000557222 FLRT3Q9NZU0 649 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 TMEM216Q9P0N5 145 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 ADAM30Q9UKF2 790 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 RNF115Q9Y4L5 304 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
VRK1-206ENST00000557222 A0A1W2PRB8 838 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 CXCL13O43927 109 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 GCM2O75603 506 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 OXSR1O95747 527 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 PLAUP00749 431 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 IGKV1D-16P01601 117 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 TP53P04637 393 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 ABHD2P08910 425 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 PRPH2P23942 346 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 ELK4P28324 431 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 AGTR1P30556 359 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 ZNF41P51814 821 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 CARD18P57730 90 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 BTKQ06187 659 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 P2RY6Q15077 328 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 IMPG1Q17R60 797 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 PRSS53Q2L4Q9 553 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 TMEM201Q5SNT2 666 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 NCMAPQ5T1S8 102 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 UBAP2Q5T6F2 1119 aaKnown RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 HBMQ6B0K9 141 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 NOXRED1Q6NXP6 359 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 MTERF4Q7Z6M4 381 aaKnown RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 HIPK1Q86Z02 1210 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 GABRG1Q8N1C3 465 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 SLC43A2Q8N370 569 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 ZFP28Q8NHY6 868 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 GPR151Q8TDV0 419 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 OSTF1Q92882 214 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 FBXW5Q969U6 566 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 CPNE4Q96A23 557 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 ZBED6CLQ96FA7 236 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 REXO5Q96IC2 774 aaKnown RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 KLHL15Q96M94 604 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 EBPLQ9BY08 206 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 REG4Q9BYZ8 158 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 BARX1Q9HBU1 254 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 UBQLN4Q9NRR5 601 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 ACSS1Q9NUB1 689 aaPredicted RBP7.71□□□□□ -1.18
VRK1-206ENST00000557222 MED17Q9NVC6 651 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 DCDC2Q9UHG0 476 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 LAMP3Q9UQV4 416 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 VDAC3Q9Y277 283 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 TIMM22Q9Y584 194 aa7.71□□□□□ -1.18
VRK1-206ENST00000557222 FREM1Q5H8C1 2179 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 A0A0J9YW62 118 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 EXOC1LA0A1B0GW35 172 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 GXYLT2A0PJZ3 443 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 GJE1A6NN92 205 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 KIF2AO00139 706 aaPredicted RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 TNFSF11O14788 317 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 PDPK1O15530 556 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 CD5LO43866 347 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms